Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LINC00116Q8NCU8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.39■■□□□ 1.82
LINC00116Q8NCU8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
LINC00116Q8NCU8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
LINC00116Q8NCU8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LINC00116Q8NCU8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC26.39■■□□□ 1.82
LINC00116Q8NCU8 KRASP1-201ENST00000407852 552 ntBASIC26.39■■□□□ 1.82
LINC00116Q8NCU8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC26.39■■□□□ 1.82
LINC00116Q8NCU8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
LINC00116Q8NCU8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC26.39■■□□□ 1.82
LINC00116Q8NCU8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
LINC00116Q8NCU8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.39■■□□□ 1.81
LINC00116Q8NCU8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 AL355075.4-201ENST00000554988 638 ntBASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 AC110285.5-201ENST00000611501 352 ntBASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 AC116050.2-201ENST00000612102 1779 ntBASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LINC00116Q8NCU8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.37■■□□□ 1.81
LINC00116Q8NCU8 FAM99A-202ENST00000538190 1989 ntBASIC26.37■■□□□ 1.81
LINC00116Q8NCU8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
LINC00116Q8NCU8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
LINC00116Q8NCU8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC26.37■■□□□ 1.81
LINC00116Q8NCU8 AC005829.2-201ENST00000571422 1056 ntBASIC26.37■■□□□ 1.81
LINC00116Q8NCU8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC26.37■■□□□ 1.81
LINC00116Q8NCU8 MIR4785-201ENST00000585005 73 ntBASIC26.37■■□□□ 1.81
LINC00116Q8NCU8 AC097493.4-201ENST00000641197 219 ntBASIC26.37■■□□□ 1.81
LINC00116Q8NCU8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC26.37■■□□□ 1.81
LINC00116Q8NCU8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LINC00116Q8NCU8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.36■■□□□ 1.81
LINC00116Q8NCU8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
LINC00116Q8NCU8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC26.36■■□□□ 1.81
LINC00116Q8NCU8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
LINC00116Q8NCU8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC26.36■■□□□ 1.81
LINC00116Q8NCU8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC26.36■■□□□ 1.81
LINC00116Q8NCU8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC26.36■■□□□ 1.81
LINC00116Q8NCU8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC26.36■■□□□ 1.81
LINC00116Q8NCU8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
LINC00116Q8NCU8 AC087633.2-202ENST00000565166 1439 ntBASIC26.36■■□□□ 1.81
LINC00116Q8NCU8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LINC00116Q8NCU8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
LINC00116Q8NCU8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
LINC00116Q8NCU8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.36■■□□□ 1.81
LINC00116Q8NCU8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LINC00116Q8NCU8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.35■■□□□ 1.81
LINC00116Q8NCU8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LINC00116Q8NCU8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LINC00116Q8NCU8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
LINC00116Q8NCU8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
LINC00116Q8NCU8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC26.35■■□□□ 1.81
LINC00116Q8NCU8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC26.34■■□□□ 1.81
LINC00116Q8NCU8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
LINC00116Q8NCU8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LINC00116Q8NCU8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC26.34■■□□□ 1.81
LINC00116Q8NCU8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
LINC00116Q8NCU8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC26.34■■□□□ 1.81
LINC00116Q8NCU8 AP001412.1-201ENST00000608405 714 ntBASIC26.34■■□□□ 1.81
LINC00116Q8NCU8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC26.34■■□□□ 1.81
LINC00116Q8NCU8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
LINC00116Q8NCU8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
LINC00116Q8NCU8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LINC00116Q8NCU8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 PENK-204ENST00000518770 863 ntTSL 2 BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
LINC00116Q8NCU8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 AL135905.2-201ENST00000584934 1404 ntBASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms