Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC32.46■■■□□ 2.79
VPS8Q8N3P4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC32.46■■■□□ 2.79
VPS8Q8N3P4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC32.46■■■□□ 2.79
VPS8Q8N3P4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC32.46■■■□□ 2.79
VPS8Q8N3P4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC32.46■■■□□ 2.79
VPS8Q8N3P4 KRT18P6-201ENST00000555540 1265 ntBASIC32.46■■■□□ 2.79
VPS8Q8N3P4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
VPS8Q8N3P4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC32.46■■■□□ 2.79
VPS8Q8N3P4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
VPS8Q8N3P4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC32.46■■■□□ 2.79
VPS8Q8N3P4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
VPS8Q8N3P4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
VPS8Q8N3P4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
VPS8Q8N3P4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC32.45■■■□□ 2.79
VPS8Q8N3P4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC32.45■■■□□ 2.79
VPS8Q8N3P4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC32.45■■■□□ 2.79
VPS8Q8N3P4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC32.45■■■□□ 2.79
VPS8Q8N3P4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC32.45■■■□□ 2.79
VPS8Q8N3P4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC32.45■■■□□ 2.79
VPS8Q8N3P4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
VPS8Q8N3P4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
VPS8Q8N3P4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
VPS8Q8N3P4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC32.44■■■□□ 2.78
VPS8Q8N3P4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC32.44■■■□□ 2.78
VPS8Q8N3P4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC32.44■■■□□ 2.78
VPS8Q8N3P4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
VPS8Q8N3P4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC32.44■■■□□ 2.78
VPS8Q8N3P4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.78
VPS8Q8N3P4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
VPS8Q8N3P4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
VPS8Q8N3P4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
VPS8Q8N3P4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC32.43■■■□□ 2.78
VPS8Q8N3P4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
VPS8Q8N3P4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
VPS8Q8N3P4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
VPS8Q8N3P4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC32.43■■■□□ 2.78
VPS8Q8N3P4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
VPS8Q8N3P4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
VPS8Q8N3P4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
VPS8Q8N3P4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC32.43■■■□□ 2.78
VPS8Q8N3P4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC32.43■■■□□ 2.78
VPS8Q8N3P4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
VPS8Q8N3P4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC32.42■■■□□ 2.78
VPS8Q8N3P4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
VPS8Q8N3P4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
VPS8Q8N3P4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC32.42■■■□□ 2.78
VPS8Q8N3P4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
VPS8Q8N3P4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC32.42■■■□□ 2.78
VPS8Q8N3P4 AL589743.5-201ENST00000616611 1050 ntBASIC32.42■■■□□ 2.78
VPS8Q8N3P4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
VPS8Q8N3P4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC32.41■■■□□ 2.78
VPS8Q8N3P4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
VPS8Q8N3P4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
VPS8Q8N3P4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
VPS8Q8N3P4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
VPS8Q8N3P4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
VPS8Q8N3P4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
VPS8Q8N3P4 OR2A1-AS1-201ENST00000462305 773 ntBASIC32.41■■■□□ 2.78
VPS8Q8N3P4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC32.41■■■□□ 2.78
VPS8Q8N3P4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC32.41■■■□□ 2.78
VPS8Q8N3P4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC32.41■■■□□ 2.78
VPS8Q8N3P4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
VPS8Q8N3P4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC32.41■■■□□ 2.78
VPS8Q8N3P4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC32.41■■■□□ 2.78
VPS8Q8N3P4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
VPS8Q8N3P4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
VPS8Q8N3P4 SERPINH1P1-201ENST00000419794 1249 ntBASIC32.4■■■□□ 2.78
VPS8Q8N3P4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC32.4■■■□□ 2.78
VPS8Q8N3P4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC32.39■■■□□ 2.78
VPS8Q8N3P4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC32.39■■■□□ 2.78
VPS8Q8N3P4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC32.39■■■□□ 2.78
VPS8Q8N3P4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
VPS8Q8N3P4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC32.39■■■□□ 2.78
VPS8Q8N3P4 KRT18P68-201ENST00000392293 1000 ntBASIC32.39■■■□□ 2.78
VPS8Q8N3P4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC32.39■■■□□ 2.78
VPS8Q8N3P4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
VPS8Q8N3P4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
VPS8Q8N3P4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
VPS8Q8N3P4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC32.38■■■□□ 2.77
VPS8Q8N3P4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC32.38■■■□□ 2.77
VPS8Q8N3P4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
VPS8Q8N3P4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
VPS8Q8N3P4 AC027702.1-201ENST00000563810 1770 ntBASIC32.37■■■□□ 2.77
VPS8Q8N3P4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC32.37■■■□□ 2.77
VPS8Q8N3P4 LSM12P1-201ENST00000411836 588 ntBASIC32.37■■■□□ 2.77
VPS8Q8N3P4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC32.37■■■□□ 2.77
VPS8Q8N3P4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
VPS8Q8N3P4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC32.37■■■□□ 2.77
VPS8Q8N3P4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
VPS8Q8N3P4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
VPS8Q8N3P4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC32.37■■■□□ 2.77
VPS8Q8N3P4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
VPS8Q8N3P4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
VPS8Q8N3P4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
VPS8Q8N3P4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC32.36■■■□□ 2.77
VPS8Q8N3P4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC32.36■■■□□ 2.77
VPS8Q8N3P4 MIR4651-201ENST00000582622 73 ntBASIC32.36■■■□□ 2.77
VPS8Q8N3P4 AL356652.1-201ENST00000615962 565 ntBASIC32.36■■■□□ 2.77
VPS8Q8N3P4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
VPS8Q8N3P4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC32.36■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms