Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CLIP4Q8N3C7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP4Q8N3C7 AC053503.5-201ENST00000601508 636 ntBASIC19.25■□□□□ 0.67
CLIP4Q8N3C7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP4Q8N3C7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP4Q8N3C7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.25■□□□□ 0.67
CLIP4Q8N3C7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP4Q8N3C7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLIP4Q8N3C7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP4Q8N3C7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP4Q8N3C7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
CLIP4Q8N3C7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CLIP4Q8N3C7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLIP4Q8N3C7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP4Q8N3C7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CLIP4Q8N3C7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP4Q8N3C7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.24■□□□□ 0.67
CLIP4Q8N3C7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP4Q8N3C7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP4Q8N3C7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP4Q8N3C7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP4Q8N3C7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP4Q8N3C7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.24■□□□□ 0.67
CLIP4Q8N3C7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLIP4Q8N3C7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CLIP4Q8N3C7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP4Q8N3C7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.23■□□□□ 0.67
CLIP4Q8N3C7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.23■□□□□ 0.67
CLIP4Q8N3C7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP4Q8N3C7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP4Q8N3C7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP4Q8N3C7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLIP4Q8N3C7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP4Q8N3C7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP4Q8N3C7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.23■□□□□ 0.67
CLIP4Q8N3C7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP4Q8N3C7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.23■□□□□ 0.67
CLIP4Q8N3C7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLIP4Q8N3C7 AC061975.6-201ENST00000579045 1553 ntBASIC19.23■□□□□ 0.67
CLIP4Q8N3C7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.23■□□□□ 0.67
CLIP4Q8N3C7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP4Q8N3C7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.22■□□□□ 0.67
CLIP4Q8N3C7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP4Q8N3C7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CLIP4Q8N3C7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP4Q8N3C7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP4Q8N3C7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP4Q8N3C7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP4Q8N3C7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP4Q8N3C7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP4Q8N3C7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP4Q8N3C7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CLIP4Q8N3C7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP4Q8N3C7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CLIP4Q8N3C7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLIP4Q8N3C7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 AC006128.1-201ENST00000624704 1661 ntBASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLIP4Q8N3C7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 AC079140.4-201ENST00000507448 529 ntBASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 AC121338.2-201ENST00000622535 1744 ntBASIC19.2■□□□□ 0.66
CLIP4Q8N3C7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLIP4Q8N3C7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.19■□□□□ 0.66
CLIP4Q8N3C7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLIP4Q8N3C7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLIP4Q8N3C7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.19■□□□□ 0.66
CLIP4Q8N3C7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLIP4Q8N3C7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.19■□□□□ 0.66
CLIP4Q8N3C7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms