Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SIX5Q8N196 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIX5Q8N196 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIX5Q8N196 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIX5Q8N196 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.16■□□□□ 0.98
SIX5Q8N196 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIX5Q8N196 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIX5Q8N196 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.16■□□□□ 0.98
SIX5Q8N196 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIX5Q8N196 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIX5Q8N196 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIX5Q8N196 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIX5Q8N196 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SIX5Q8N196 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIX5Q8N196 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.16■□□□□ 0.98
SIX5Q8N196 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.16■□□□□ 0.98
SIX5Q8N196 AC133681.1-201ENST00000465482 601 ntBASIC21.16■□□□□ 0.98
SIX5Q8N196 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIX5Q8N196 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SIX5Q8N196 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIX5Q8N196 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SIX5Q8N196 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIX5Q8N196 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.16■□□□□ 0.98
SIX5Q8N196 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIX5Q8N196 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIX5Q8N196 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIX5Q8N196 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIX5Q8N196 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIX5Q8N196 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.15■□□□□ 0.98
SIX5Q8N196 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SIX5Q8N196 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.15■□□□□ 0.98
SIX5Q8N196 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIX5Q8N196 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIX5Q8N196 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIX5Q8N196 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SIX5Q8N196 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIX5Q8N196 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.15■□□□□ 0.98
SIX5Q8N196 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.15■□□□□ 0.98
SIX5Q8N196 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.15■□□□□ 0.98
SIX5Q8N196 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIX5Q8N196 AC113410.3-201ENST00000623366 203 ntBASIC21.15■□□□□ 0.98
SIX5Q8N196 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIX5Q8N196 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIX5Q8N196 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIX5Q8N196 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIX5Q8N196 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIX5Q8N196 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIX5Q8N196 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.15■□□□□ 0.98
SIX5Q8N196 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIX5Q8N196 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
SIX5Q8N196 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
SIX5Q8N196 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.14■□□□□ 0.98
SIX5Q8N196 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
SIX5Q8N196 CYP21A1P-202ENST00000354927 1481 ntBASIC21.14■□□□□ 0.98
SIX5Q8N196 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIX5Q8N196 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.14■□□□□ 0.97
SIX5Q8N196 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SIX5Q8N196 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.14■□□□□ 0.97
SIX5Q8N196 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SIX5Q8N196 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.14■□□□□ 0.97
SIX5Q8N196 AL355075.4-201ENST00000554988 638 ntBASIC21.14■□□□□ 0.97
SIX5Q8N196 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.14■□□□□ 0.97
SIX5Q8N196 AC012306.2-201ENST00000609350 630 ntBASIC21.14■□□□□ 0.97
SIX5Q8N196 AC105020.6-201ENST00000621523 1217 ntBASIC21.14■□□□□ 0.97
SIX5Q8N196 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIX5Q8N196 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIX5Q8N196 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIX5Q8N196 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
SIX5Q8N196 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SIX5Q8N196 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIX5Q8N196 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SIX5Q8N196 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIX5Q8N196 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SIX5Q8N196 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SIX5Q8N196 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.13■□□□□ 0.97
SIX5Q8N196 AC110285.5-201ENST00000611501 352 ntBASIC21.13■□□□□ 0.97
SIX5Q8N196 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIX5Q8N196 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIX5Q8N196 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIX5Q8N196 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
SIX5Q8N196 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
SIX5Q8N196 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.12■□□□□ 0.97
SIX5Q8N196 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIX5Q8N196 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIX5Q8N196 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SIX5Q8N196 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIX5Q8N196 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.12■□□□□ 0.97
SIX5Q8N196 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIX5Q8N196 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIX5Q8N196 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.12■□□□□ 0.97
SIX5Q8N196 TMPOP1-202ENST00000424642 1267 ntBASIC21.12■□□□□ 0.97
SIX5Q8N196 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIX5Q8N196 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.12■□□□□ 0.97
SIX5Q8N196 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.12■□□□□ 0.97
SIX5Q8N196 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.12■□□□□ 0.97
SIX5Q8N196 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.12■□□□□ 0.97
SIX5Q8N196 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIX5Q8N196 C11orf96-202ENST00000528572 1834 ntBASIC21.12■□□□□ 0.97
SIX5Q8N196 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIX5Q8N196 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms