Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.03■■□□□ 1.28
CCDC60Q8IWA6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC60Q8IWA6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 KRT18P68-201ENST00000392293 1000 ntBASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CCDC60Q8IWA6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 AL589743.5-201ENST00000616611 1050 ntBASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CCDC60Q8IWA6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CCDC60Q8IWA6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC60Q8IWA6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
CCDC60Q8IWA6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC60Q8IWA6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23■■□□□ 1.27
CCDC60Q8IWA6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC60Q8IWA6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23■■□□□ 1.27
CCDC60Q8IWA6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23■■□□□ 1.27
CCDC60Q8IWA6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23■■□□□ 1.27
CCDC60Q8IWA6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC60Q8IWA6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC60Q8IWA6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC60Q8IWA6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC60Q8IWA6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC60Q8IWA6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC60Q8IWA6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.99■■□□□ 1.27
CCDC60Q8IWA6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.99■■□□□ 1.27
CCDC60Q8IWA6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC60Q8IWA6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC60Q8IWA6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC60Q8IWA6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.97■■□□□ 1.27
CCDC60Q8IWA6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC60Q8IWA6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC60Q8IWA6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CCDC60Q8IWA6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CCDC60Q8IWA6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
CCDC60Q8IWA6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC60Q8IWA6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
CCDC60Q8IWA6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC60Q8IWA6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC60Q8IWA6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC60Q8IWA6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.97■■□□□ 1.27
CCDC60Q8IWA6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC60Q8IWA6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC60Q8IWA6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.96■■□□□ 1.27
CCDC60Q8IWA6 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms