Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 NXN-202ENST00000537628 1340 ntTSL 3 BASIC31.55■■■□□ 2.64
CDC42BPAQ5VT25 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CDC42BPAQ5VT25 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC31.55■■■□□ 2.64
CDC42BPAQ5VT25 AC233702.5-201ENST00000584107 538 ntBASIC31.55■■■□□ 2.64
CDC42BPAQ5VT25 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
CDC42BPAQ5VT25 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CDC42BPAQ5VT25 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
CDC42BPAQ5VT25 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
CDC42BPAQ5VT25 DHDH-203ENST00000522614 776 ntTSL 5 BASIC31.54■■■□□ 2.64
CDC42BPAQ5VT25 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC31.54■■■□□ 2.64
CDC42BPAQ5VT25 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC31.54■■■□□ 2.64
CDC42BPAQ5VT25 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC31.54■■■□□ 2.64
CDC42BPAQ5VT25 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
CDC42BPAQ5VT25 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC31.53■■■□□ 2.64
CDC42BPAQ5VT25 EXOC3-AS1-202ENST00000623673 1663 ntBASIC31.53■■■□□ 2.64
CDC42BPAQ5VT25 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CDC42BPAQ5VT25 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
CDC42BPAQ5VT25 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CDC42BPAQ5VT25 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CDC42BPAQ5VT25 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC31.53■■■□□ 2.64
CDC42BPAQ5VT25 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC31.53■■■□□ 2.64
CDC42BPAQ5VT25 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CDC42BPAQ5VT25 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
CDC42BPAQ5VT25 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CDC42BPAQ5VT25 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 RPS2P55-201ENST00000397318 883 ntBASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 AC239809.2-201ENST00000415381 517 ntBASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 AC107956.1-201ENST00000494359 873 ntBASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 TSPY7P-201ENST00000431358 1114 ntBASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC31.52■■■□□ 2.64
CDC42BPAQ5VT25 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC31.51■■■□□ 2.64
CDC42BPAQ5VT25 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
CDC42BPAQ5VT25 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CDC42BPAQ5VT25 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CDC42BPAQ5VT25 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC31.51■■■□□ 2.63
CDC42BPAQ5VT25 BX088651.1-201ENST00000540551 451 ntBASIC31.51■■■□□ 2.63
CDC42BPAQ5VT25 AL355075.4-201ENST00000554988 638 ntBASIC31.51■■■□□ 2.63
CDC42BPAQ5VT25 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CDC42BPAQ5VT25 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
CDC42BPAQ5VT25 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
CDC42BPAQ5VT25 ME2-208ENST00000638937 2471 ntTSL 5 BASIC31.5■■■□□ 2.63
CDC42BPAQ5VT25 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC31.5■■■□□ 2.63
CDC42BPAQ5VT25 GGT1-206ENST00000404223 952 ntTSL 2 BASIC31.5■■■□□ 2.63
CDC42BPAQ5VT25 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC31.5■■■□□ 2.63
CDC42BPAQ5VT25 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CDC42BPAQ5VT25 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CDC42BPAQ5VT25 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CDC42BPAQ5VT25 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC31.5■■■□□ 2.63
CDC42BPAQ5VT25 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC31.5■■■□□ 2.63
CDC42BPAQ5VT25 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC31.5■■■□□ 2.63
CDC42BPAQ5VT25 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC31.49■■■□□ 2.63
CDC42BPAQ5VT25 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDC42BPAQ5VT25 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CDC42BPAQ5VT25 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CDC42BPAQ5VT25 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDC42BPAQ5VT25 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC31.49■■■□□ 2.63
CDC42BPAQ5VT25 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
CDC42BPAQ5VT25 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDC42BPAQ5VT25 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC31.49■■■□□ 2.63
CDC42BPAQ5VT25 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CDC42BPAQ5VT25 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDC42BPAQ5VT25 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC31.49■■■□□ 2.63
CDC42BPAQ5VT25 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CDC42BPAQ5VT25 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
CDC42BPAQ5VT25 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CDC42BPAQ5VT25 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC31.48■■■□□ 2.63
CDC42BPAQ5VT25 AC005829.2-201ENST00000571422 1056 ntBASIC31.48■■■□□ 2.63
CDC42BPAQ5VT25 LINC01023-201ENST00000606054 436 ntBASIC31.48■■■□□ 2.63
CDC42BPAQ5VT25 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
CDC42BPAQ5VT25 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CDC42BPAQ5VT25 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CDC42BPAQ5VT25 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
CDC42BPAQ5VT25 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC31.48■■■□□ 2.63
CDC42BPAQ5VT25 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CDC42BPAQ5VT25 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CDC42BPAQ5VT25 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CDC42BPAQ5VT25 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
CDC42BPAQ5VT25 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC31.47■■■□□ 2.63
CDC42BPAQ5VT25 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
CDC42BPAQ5VT25 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC31.47■■■□□ 2.63
CDC42BPAQ5VT25 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
CDC42BPAQ5VT25 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CDC42BPAQ5VT25 C2orf69P4-201ENST00000565394 541 ntBASIC31.47■■■□□ 2.63
CDC42BPAQ5VT25 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC31.47■■■□□ 2.63
CDC42BPAQ5VT25 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CDC42BPAQ5VT25 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC31.47■■■□□ 2.63
CDC42BPAQ5VT25 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC31.47■■■□□ 2.63
CDC42BPAQ5VT25 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms