Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
LINC01554Q52M75 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC10.34□□□□□ -0.75
LINC01554Q52M75 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01554Q52M75 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
LINC01554Q52M75 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01554Q52M75 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
LINC01554Q52M75 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LINC01554Q52M75 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01554Q52M75 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01554Q52M75 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LINC01554Q52M75 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
LINC01554Q52M75 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01554Q52M75 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
LINC01554Q52M75 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
LINC01554Q52M75 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
LINC01554Q52M75 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LINC01554Q52M75 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC10.33□□□□□ -0.76
LINC01554Q52M75 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
LINC01554Q52M75 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
LINC01554Q52M75 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01554Q52M75 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC10.32□□□□□ -0.76
LINC01554Q52M75 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC01554Q52M75 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.76
LINC01554Q52M75 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC01554Q52M75 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC01554Q52M75 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LINC01554Q52M75 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC01554Q52M75 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 AC098818.2-201ENST00000564925 2320 ntBASIC10.32□□□□□ -0.76
LINC01554Q52M75 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
LINC01554Q52M75 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC01554Q52M75 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
LINC01554Q52M75 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LINC01554Q52M75 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
LINC01554Q52M75 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
LINC01554Q52M75 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LINC01554Q52M75 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LINC01554Q52M75 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC01554Q52M75 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
LINC01554Q52M75 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC01554Q52M75 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms