Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 RBL2YOR265W 321 nt2.21□□□□□ -2.06
CLP1Q08685 YJL049WYJL049W 1353 nt2.21□□□□□ -2.06
CLP1Q08685 SSE1YPL106C 2082 nt2.21□□□□□ -2.06
CLP1Q08685 PIG2YIL045W 1617 nt2.2□□□□□ -2.06
CLP1Q08685 GCN4YEL009C 846 nt2.2□□□□□ -2.06
CLP1Q08685 YKL065W-AYKL065W-A 222 nt2.2□□□□□ -2.06
CLP1Q08685 SEC66YBR171W 621 nt2.2□□□□□ -2.06
CLP1Q08685 DPB3YBR278W 606 nt2.2□□□□□ -2.06
CLP1Q08685 YBR287WYBR287W 1284 nt2.2□□□□□ -2.06
CLP1Q08685 TAE2YPL009C 3117 nt2.2□□□□□ -2.06
CLP1Q08685 YDR261W-AYDR261W-A 1317 nt2.19□□□□□ -2.06
CLP1Q08685 YCT1YLL055W 1596 nt2.19□□□□□ -2.06
CLP1Q08685 NEO1YIL048W 3456 nt2.19□□□□□ -2.06
CLP1Q08685 RMP1YLR145W 606 nt2.19□□□□□ -2.06
CLP1Q08685 URA5YML106W 681 nt2.19□□□□□ -2.06
CLP1Q08685 CBF2YGR140W 2871 nt2.19□□□□□ -2.06
CLP1Q08685 ATG9YDL149W 2994 nt2.19□□□□□ -2.06
CLP1Q08685 PSK2YOL045W 3306 nt2.19□□□□□ -2.06
CLP1Q08685 MPH1YIR002C 2982 nt2.18□□□□□ -2.06
CLP1Q08685 DNF1YER166W 4716 nt2.18□□□□□ -2.06
CLP1Q08685 snR83snR83 306 nt2.18□□□□□ -2.06
CLP1Q08685 VEL1YGL258W 621 nt2.18□□□□□ -2.06
CLP1Q08685 YPS5YGL259W 498 nt2.18□□□□□ -2.06
CLP1Q08685 YNL050CYNL050C 813 nt2.18□□□□□ -2.06
CLP1Q08685 SRL1YOR247W 633 nt2.18□□□□□ -2.06
CLP1Q08685 DGK1YOR311C 873 nt2.18□□□□□ -2.06
CLP1Q08685 ATP20YPR020W 348 nt2.18□□□□□ -2.06
CLP1Q08685 YCL023CYCL023C 348 nt2.18□□□□□ -2.06
CLP1Q08685 GYP5YPL249C 2685 nt2.18□□□□□ -2.06
CLP1Q08685 GUP1YGL084C 1683 nt2.18□□□□□ -2.06
CLP1Q08685 ESA1YOR244W 1338 nt2.17□□□□□ -2.06
CLP1Q08685 IRC8YJL051W 2469 nt2.17□□□□□ -2.06
CLP1Q08685 NOP56YLR197W 1515 nt2.17□□□□□ -2.06
CLP1Q08685 BUD2YKL092C 3315 nt2.17□□□□□ -2.06
CLP1Q08685 GPM2YDL021W 936 nt2.17□□□□□ -2.06
CLP1Q08685 YPD1YDL235C 504 nt2.17□□□□□ -2.06
CLP1Q08685 YHL048C-AYHL048C-A 135 nt2.17□□□□□ -2.06
CLP1Q08685 EST3YIL009C-A 546 nt2.17□□□□□ -2.06
CLP1Q08685 ARF3YOR094W 552 nt2.17□□□□□ -2.06
CLP1Q08685 PEX27YOR193W 1131 nt2.17□□□□□ -2.06
CLP1Q08685 DBF20YPR111W 1695 nt2.17□□□□□ -2.06
CLP1Q08685 NGG1YDR176W 2109 nt2.17□□□□□ -2.06
CLP1Q08685 ALK2YBL009W 2031 nt2.17□□□□□ -2.06
CLP1Q08685 GDI1YER136W 1356 nt2.16□□□□□ -2.06
CLP1Q08685 HLR1YDR528W 1272 nt2.16□□□□□ -2.06
CLP1Q08685 YER119C-AYER119C-A 372 nt2.16□□□□□ -2.06
CLP1Q08685 STE2YFL026W 1296 nt2.16□□□□□ -2.06
CLP1Q08685 YLR217WYLR217W 324 nt2.16□□□□□ -2.06
CLP1Q08685 YLR255CYLR255C 354 nt2.16□□□□□ -2.06
CLP1Q08685 FAR3YMR052W 615 nt2.16□□□□□ -2.06
CLP1Q08685 TSR4YOL022C 1227 nt2.16□□□□□ -2.06
CLP1Q08685 YOR277CYOR277C 309 nt2.16□□□□□ -2.06
CLP1Q08685 YBP2YGL060W 1926 nt2.16□□□□□ -2.06
CLP1Q08685 TRM82YDR165W 1335 nt2.16□□□□□ -2.06
CLP1Q08685 YDR170W-AYDR170W-A 1323 nt2.16□□□□□ -2.06
CLP1Q08685 YNL284C-AYNL284C-A 1323 nt2.16□□□□□ -2.06
CLP1Q08685 ERT1YBR239C 1590 nt2.15□□□□□ -2.06
CLP1Q08685 CLN3YAL040C 1743 nt2.15□□□□□ -2.07
CLP1Q08685 snR68snR68 136 nt2.15□□□□□ -2.07
CLP1Q08685 DIG2YDR480W 972 nt2.15□□□□□ -2.07
CLP1Q08685 RMD6YEL072W 696 nt2.15□□□□□ -2.07
CLP1Q08685 YER158W-AYER158W-A 216 nt2.15□□□□□ -2.07
CLP1Q08685 YFL015CYFL015C 495 nt2.15□□□□□ -2.07
CLP1Q08685 GOS1YHL031C 672 nt2.15□□□□□ -2.07
CLP1Q08685 YJL114WYJL114W 681 nt2.15□□□□□ -2.07
CLP1Q08685 YKL070WYKL070W 510 nt2.15□□□□□ -2.07
CLP1Q08685 YAL059C-AYAL059C-A 423 nt2.15□□□□□ -2.07
CLP1Q08685 YLR050CYLR050C 486 nt2.15□□□□□ -2.07
CLP1Q08685 YPT6YLR262C 648 nt2.15□□□□□ -2.07
CLP1Q08685 snR24snR24 89 nt2.15□□□□□ -2.07
CLP1Q08685 AGC1YPR021C 2709 nt2.15□□□□□ -2.07
CLP1Q08685 CST9YLR394W 1449 nt2.15□□□□□ -2.07
CLP1Q08685 IRA2YOL081W 9240 nt2.15□□□□□ -2.07
CLP1Q08685 VPS38YLR360W 1320 nt2.15□□□□□ -2.07
CLP1Q08685 AEP1YMR064W 1557 nt2.15□□□□□ -2.07
CLP1Q08685 RAV1YJR033C 4074 nt2.14□□□□□ -2.07
CLP1Q08685 YEA4YEL004W 1029 nt2.14□□□□□ -2.07
CLP1Q08685 YEL050W-AYEL050W-A 192 nt2.14□□□□□ -2.07
CLP1Q08685 EMP24YGL200C 612 nt2.14□□□□□ -2.07
CLP1Q08685 YJL052C-AYJL052C-A 120 nt2.14□□□□□ -2.07
CLP1Q08685 TMA7YLR262C-A 195 nt2.14□□□□□ -2.07
CLP1Q08685 UFD4YKL010C 4452 nt2.14□□□□□ -2.07
CLP1Q08685 TFC3YAL001C 3483 nt2.14□□□□□ -2.07
CLP1Q08685 PEX8YGR077C 1770 nt2.13□□□□□ -2.07
CLP1Q08685 KOG1YHR186C 4674 nt2.13□□□□□ -2.07
CLP1Q08685 GIS1YDR096W 2685 nt2.13□□□□□ -2.07
CLP1Q08685 NRG1YDR043C 696 nt2.13□□□□□ -2.07
CLP1Q08685 UBC13YDR092W 462 nt2.13□□□□□ -2.07
CLP1Q08685 SAE2YGL175C 1038 nt2.13□□□□□ -2.07
CLP1Q08685 YGR115CYGR115C 780 nt2.13□□□□□ -2.07
CLP1Q08685 YKR051WYKR051W 1257 nt2.13□□□□□ -2.07
CLP1Q08685 ATG10YLL042C 504 nt2.13□□□□□ -2.07
CLP1Q08685 YMR181CYMR181C 465 nt2.13□□□□□ -2.07
CLP1Q08685 SRL4YPL033C 846 nt2.13□□□□□ -2.07
CLP1Q08685 snR35snR35 204 nt2.13□□□□□ -2.07
CLP1Q08685 ARL1YBR164C 552 nt2.13□□□□□ -2.07
CLP1Q08685 KIP1YBL063W 3336 nt2.13□□□□□ -2.07
CLP1Q08685 SRP1YNL189W 1629 nt2.13□□□□□ -2.07
CLP1Q08685 YFR016CYFR016C 3702 nt2.13□□□□□ -2.07
CLP1Q08685 ARP5YNL059C 2268 nt2.12□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 38.4 ms