Protein–RNA interactions for Protein: Q03957

CTK1, CTD kinase subunit alpha, yeastyeast

Known RBP Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK1Q03957 LAG1YHL003C 1236 nt3.32□□□□□ -1.88
CTK1Q03957 tV(CAC)DtV(CAC)D 73 nt3.32□□□□□ -1.88
CTK1Q03957 tV(CAC)HtV(CAC)H 73 nt3.32□□□□□ -1.88
CTK1Q03957 YJL169WYJL169W 369 nt3.32□□□□□ -1.88
CTK1Q03957 YKL118WYKL118W 312 nt3.32□□□□□ -1.88
CTK1Q03957 SRL3YKR091W 741 nt3.32□□□□□ -1.88
CTK1Q03957 YLR416CYLR416C 399 nt3.32□□□□□ -1.88
CTK1Q03957 LSM2YBL026W 288 nt3.32□□□□□ -1.88
CTK1Q03957 SIP18YMR175W 240 nt3.32□□□□□ -1.88
CTK1Q03957 YAF9YNL107W 681 nt3.32□□□□□ -1.88
CTK1Q03957 YBR137WYBR137W 540 nt3.32□□□□□ -1.88
CTK1Q03957 AYT1YLL063C 1425 nt3.32□□□□□ -1.88
CTK1Q03957 ATG21YPL100W 1491 nt3.32□□□□□ -1.88
CTK1Q03957 SHQ1YIL104C 1524 nt3.32□□□□□ -1.88
CTK1Q03957 BAR1YIL015W 1764 nt3.32□□□□□ -1.88
CTK1Q03957 TAF1YGR274C 3201 nt3.31□□□□□ -1.88
CTK1Q03957 ALA1YOR335C 2877 nt3.31□□□□□ -1.88
CTK1Q03957 RSC1YGR056W 2787 nt3.31□□□□□ -1.88
CTK1Q03957 SKN7YHR206W 1869 nt3.31□□□□□ -1.88
CTK1Q03957 ARG2YJL071W 1725 nt3.31□□□□□ -1.88
CTK1Q03957 YCR022CYCR022C 345 nt3.31□□□□□ -1.88
CTK1Q03957 YEL032C-AYEL032C-A 162 nt3.31□□□□□ -1.88
CTK1Q03957 FYV4YHR059W 393 nt3.31□□□□□ -1.88
CTK1Q03957 YIL054WYIL054W 318 nt3.31□□□□□ -1.88
CTK1Q03957 PAU23YLR037C 375 nt3.31□□□□□ -1.88
CTK1Q03957 IMP4YNL075W 873 nt3.31□□□□□ -1.88
CTK1Q03957 YPL038W-AYPL038W-A 192 nt3.31□□□□□ -1.88
CTK1Q03957 RNR1YER070W 2667 nt3.31□□□□□ -1.88
CTK1Q03957 MAK5YBR142W 2322 nt3.31□□□□□ -1.88
CTK1Q03957 CIN1YOR349W 3045 nt3.3□□□□□ -1.88
CTK1Q03957 MTR4YJL050W 3222 nt3.3□□□□□ -1.88
CTK1Q03957 ICY1YMR195W 384 nt3.3□□□□□ -1.88
CTK1Q03957 RSM19YNR037C 276 nt3.3□□□□□ -1.88
CTK1Q03957 YOR385WYOR385W 873 nt3.3□□□□□ -1.88
CTK1Q03957 YPL080CYPL080C 327 nt3.3□□□□□ -1.88
CTK1Q03957 YPR053CYPR053C 456 nt3.3□□□□□ -1.88
CTK1Q03957 MYO3YKL129C 3819 nt3.3□□□□□ -1.88
CTK1Q03957 RSF2YJR127C 4143 nt3.29□□□□□ -1.88
CTK1Q03957 YDL176WYDL176W 2127 nt3.29□□□□□ -1.88
CTK1Q03957 ALY1YKR021W 2748 nt3.29□□□□□ -1.88
CTK1Q03957 YGR025WYGR025W 303 nt3.29□□□□□ -1.88
CTK1Q03957 SPT4YGR063C 309 nt3.29□□□□□ -1.88
CTK1Q03957 YHL037CYHL037C 402 nt3.29□□□□□ -1.88
CTK1Q03957 BCD1YHR040W 1101 nt3.29□□□□□ -1.88
CTK1Q03957 UNG1YML021C 1080 nt3.29□□□□□ -1.88
CTK1Q03957 YMR158W-BYMR158W-B 321 nt3.29□□□□□ -1.88
CTK1Q03957 YMR316C-AYMR316C-A 312 nt3.29□□□□□ -1.88
CTK1Q03957 snR13snR13 124 nt3.29□□□□□ -1.88
CTK1Q03957 LCB5YLR260W 2064 nt3.29□□□□□ -1.88
CTK1Q03957 MKT1YNL085W 2493 nt3.29□□□□□ -1.88
CTK1Q03957 SEC6YIL068C 2418 nt3.29□□□□□ -1.88
CTK1Q03957 JJJ2YJL162C 1752 nt3.28□□□□□ -1.88
CTK1Q03957 YEL018C-AYEL018C-A 534 nt3.28□□□□□ -1.88
CTK1Q03957 RRT13YER066W 558 nt3.28□□□□□ -1.88
CTK1Q03957 RPL29YFR032C-A 180 nt3.28□□□□□ -1.88
CTK1Q03957 RPB9YGL070C 369 nt3.28□□□□□ -1.88
CTK1Q03957 YKL083WYKL083W 615 nt3.28□□□□□ -1.88
CTK1Q03957 SHH3YMR118C 591 nt3.28□□□□□ -1.88
CTK1Q03957 TIR2YOR010C 756 nt3.28□□□□□ -1.88
CTK1Q03957 YPL039WYPL039W 951 nt3.28□□□□□ -1.88
CTK1Q03957 YPR039WYPR039W 336 nt3.28□□□□□ -1.88
CTK1Q03957 YPR108W-AYPR108W-A 213 nt3.28□□□□□ -1.88
CTK1Q03957 PMT6YGR199W 2280 nt3.28□□□□□ -1.88
CTK1Q03957 SLP1YOR154W 1764 nt3.28□□□□□ -1.89
CTK1Q03957 NIC96YFR002W 2520 nt3.27□□□□□ -1.89
CTK1Q03957 YDR193WYDR193W 399 nt3.27□□□□□ -1.89
CTK1Q03957 YDR464C-AYDR464C-A 189 nt3.27□□□□□ -1.89
CTK1Q03957 YHR139C-AYHR139C-A 312 nt3.27□□□□□ -1.89
CTK1Q03957 YMR031W-AYMR031W-A 327 nt3.27□□□□□ -1.89
CTK1Q03957 DGK1YOR311C 873 nt3.27□□□□□ -1.89
CTK1Q03957 CCM1YGR150C 2595 nt3.26□□□□□ -1.89
CTK1Q03957 TOP1YOL006C 2310 nt3.26□□□□□ -1.89
CTK1Q03957 MDN1YLR106C 14733 nt3.26□□□□□ -1.89
CTK1Q03957 YDL152WYDL152W 366 nt3.26□□□□□ -1.89
CTK1Q03957 NHP2YDL208W 471 nt3.26□□□□□ -1.89
CTK1Q03957 YHR214W-AYHR214W-A 486 nt3.26□□□□□ -1.89
CTK1Q03957 YAR068WYAR068W 486 nt3.26□□□□□ -1.89
CTK1Q03957 VTI1YMR197C 654 nt3.26□□□□□ -1.89
CTK1Q03957 RPS8AYBL072C 603 nt3.26□□□□□ -1.89
CTK1Q03957 RPB11YOL005C 363 nt3.26□□□□□ -1.89
CTK1Q03957 YOL019W-AYOL019W-A 153 nt3.26□□□□□ -1.89
CTK1Q03957 MES1YGR264C 2256 nt3.26□□□□□ -1.89
CTK1Q03957 YLR352WYLR352W 2424 nt3.25□□□□□ -1.89
CTK1Q03957 PRP22YER013W 3438 nt3.25□□□□□ -1.89
CTK1Q03957 MSR1YHR091C 1932 nt3.25□□□□□ -1.89
CTK1Q03957 YDL068WYDL068W 330 nt3.25□□□□□ -1.89
CTK1Q03957 SOD1YJR104C 465 nt3.25□□□□□ -1.89
CTK1Q03957 YAR053WYAR053W 297 nt3.25□□□□□ -1.89
CTK1Q03957 YOR146WYOR146W 306 nt3.25□□□□□ -1.89
CTK1Q03957 NSL1YPL233W 651 nt3.25□□□□□ -1.89
CTK1Q03957 ATP25YMR098C 1839 nt3.25□□□□□ -1.89
CTK1Q03957 SMC3YJL074C 3693 nt3.24□□□□□ -1.89
CTK1Q03957 URB2YJR041C 3525 nt3.24□□□□□ -1.89
CTK1Q03957 GLC3YEL011W 2115 nt3.24□□□□□ -1.89
CTK1Q03957 YER097WYER097W 330 nt3.24□□□□□ -1.89
CTK1Q03957 RAD6YGL058W 519 nt3.24□□□□□ -1.89
CTK1Q03957 YIL012WYIL012W 342 nt3.24□□□□□ -1.89
CTK1Q03957 PET191YJR034W 327 nt3.24□□□□□ -1.89
CTK1Q03957 DIE2YGR227W 1578 nt3.24□□□□□ -1.89
CTK1Q03957 KHA1YJL094C 2622 nt3.23□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms