Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 NMD2YHR077C 3270 nt1.99□□□□□ -2.09
SMD1Q02260 RRI2YOL117W 1938 nt1.99□□□□□ -2.09
SMD1Q02260 APC2YLR127C 2562 nt1.99□□□□□ -2.09
SMD1Q02260 ILS1YBL076C 3219 nt1.98□□□□□ -2.09
SMD1Q02260 DUG2YBR281C 2637 nt1.98□□□□□ -2.09
SMD1Q02260 NPR1YNL183C 2373 nt1.98□□□□□ -2.09
SMD1Q02260 TIF35YDR429C 825 nt1.98□□□□□ -2.09
SMD1Q02260 YMR31YFR049W 372 nt1.98□□□□□ -2.09
SMD1Q02260 YGR293CYGR293C 462 nt1.98□□□□□ -2.09
SMD1Q02260 YKR033CYKR033C 426 nt1.98□□□□□ -2.09
SMD1Q02260 HSP10YOR020C 321 nt1.98□□□□□ -2.09
SMD1Q02260 YOR073W-AYOR073W-A 234 nt1.98□□□□□ -2.09
SMD1Q02260 YPR050CYPR050C 414 nt1.98□□□□□ -2.09
SMD1Q02260 VID24YBR105C 1089 nt1.98□□□□□ -2.09
SMD1Q02260 FLO5YHR211W 3228 nt1.98□□□□□ -2.09
SMD1Q02260 SNF12YNR023W 1701 nt1.97□□□□□ -2.09
SMD1Q02260 TLC1TLC1 1301 nt1.97□□□□□ -2.09
SMD1Q02260 IRC2YDR112W 309 nt1.97□□□□□ -2.09
SMD1Q02260 RRT13YER066W 558 nt1.97□□□□□ -2.09
SMD1Q02260 YGL042CYGL042C 306 nt1.97□□□□□ -2.09
SMD1Q02260 MRM2YGL136C 963 nt1.97□□□□□ -2.09
SMD1Q02260 YIL029CYIL029C 429 nt1.97□□□□□ -2.09
SMD1Q02260 DFG10YIL049W 762 nt1.97□□□□□ -2.09
SMD1Q02260 RLP24YLR009W 600 nt1.97□□□□□ -2.09
SMD1Q02260 YOR283WYOR283W 693 nt1.97□□□□□ -2.09
SMD1Q02260 YPL034WYPL034W 498 nt1.97□□□□□ -2.09
SMD1Q02260 RRG8YPR116W 834 nt1.97□□□□□ -2.09
SMD1Q02260 LOA1YPR139C 903 nt1.97□□□□□ -2.09
SMD1Q02260 GYP7YDL234C 2241 nt1.97□□□□□ -2.09
SMD1Q02260 KRE33YNL132W 3171 nt1.96□□□□□ -2.1
SMD1Q02260 FAR11YNL127W 2862 nt1.96□□□□□ -2.1
SMD1Q02260 YDL009CYDL009C 324 nt1.96□□□□□ -2.1
SMD1Q02260 YDL016CYDL016C 303 nt1.96□□□□□ -2.1
SMD1Q02260 PPH3YDR075W 927 nt1.96□□□□□ -2.1
SMD1Q02260 PAU10YDR542W 363 nt1.96□□□□□ -2.1
SMD1Q02260 PAU11YGL261C 363 nt1.96□□□□□ -2.1
SMD1Q02260 YIL068W-AYIL068W-A 384 nt1.96□□□□□ -2.1
SMD1Q02260 YIL174WYIL174W 228 nt1.96□□□□□ -2.1
SMD1Q02260 YJL222W-AYJL222W-A 228 nt1.96□□□□□ -2.1
SMD1Q02260 YLR302CYLR302C 363 nt1.96□□□□□ -2.1
SMD1Q02260 RPS29AYLR388W 171 nt1.96□□□□□ -2.1
SMD1Q02260 PAU4YLR461W 363 nt1.96□□□□□ -2.1
SMD1Q02260 UBX4YMR067C 1251 nt1.96□□□□□ -2.1
SMD1Q02260 YMR304C-AYMR304C-A 351 nt1.96□□□□□ -2.1
SMD1Q02260 SWS2YNL081C 432 nt1.96□□□□□ -2.1
SMD1Q02260 YNL179CYNL179C 438 nt1.96□□□□□ -2.1
SMD1Q02260 OST2YOR103C 393 nt1.96□□□□□ -2.1
SMD1Q02260 RCN2YOR220W 798 nt1.96□□□□□ -2.1
SMD1Q02260 MEI5YPL121C 669 nt1.96□□□□□ -2.1
SMD1Q02260 Q0017Q0017 162 nt1.96□□□□□ -2.1
SMD1Q02260 FIR1YER032W 2631 nt1.96□□□□□ -2.1
SMD1Q02260 PUF4YGL014W 2667 nt1.95□□□□□ -2.1
SMD1Q02260 UBP15YMR304W 3693 nt1.95□□□□□ -2.1
SMD1Q02260 PFF1YBR074W 2931 nt1.95□□□□□ -2.1
SMD1Q02260 YEF3YLR249W 3135 nt1.95□□□□□ -2.1
SMD1Q02260 snR84snR84 550 nt1.95□□□□□ -2.1
SMD1Q02260 PEA2YER149C 1263 nt1.95□□□□□ -2.1
SMD1Q02260 ERV1YGR029W 570 nt1.95□□□□□ -2.1
SMD1Q02260 SYS1YJL004C 612 nt1.95□□□□□ -2.1
SMD1Q02260 APQ13YJL075C 417 nt1.95□□□□□ -2.1
SMD1Q02260 YMR194C-AYMR194C-A 225 nt1.95□□□□□ -2.1
SMD1Q02260 HHT2YNL031C 411 nt1.95□□□□□ -2.1
SMD1Q02260 RIO2YNL207W 1278 nt1.95□□□□□ -2.1
SMD1Q02260 SWM2YNR004W 441 nt1.95□□□□□ -2.1
SMD1Q02260 ATP3YBR039W 936 nt1.95□□□□□ -2.1
SMD1Q02260 YBR071WYBR071W 636 nt1.95□□□□□ -2.1
SMD1Q02260 ARR2YPR200C 393 nt1.95□□□□□ -2.1
SMD1Q02260 DNL4YOR005C 2835 nt1.95□□□□□ -2.1
SMD1Q02260 RLF2YPR018W 1821 nt1.95□□□□□ -2.1
SMD1Q02260 UBP16YPL072W 1500 nt1.95□□□□□ -2.1
SMD1Q02260 SUL1YBR294W 2580 nt1.94□□□□□ -2.1
SMD1Q02260 CRD1YDL142C 852 nt1.94□□□□□ -2.1
SMD1Q02260 YHL006W-AYHL006W-A 354 nt1.94□□□□□ -2.1
SMD1Q02260 PRS3YHL011C 963 nt1.94□□□□□ -2.1
SMD1Q02260 OTU2YHL013C 924 nt1.94□□□□□ -2.1
SMD1Q02260 FYV4YHR059W 393 nt1.94□□□□□ -2.1
SMD1Q02260 STE18YJR086W 333 nt1.94□□□□□ -2.1
SMD1Q02260 HRI1YLR301W 735 nt1.94□□□□□ -2.1
SMD1Q02260 LSM2YBL026W 288 nt1.94□□□□□ -2.1
SMD1Q02260 RIM9YMR063W 720 nt1.94□□□□□ -2.1
SMD1Q02260 YPR096CYPR096C 303 nt1.94□□□□□ -2.1
SMD1Q02260 SIN3YOL004W 4611 nt1.94□□□□□ -2.1
SMD1Q02260 PSK2YOL045W 3306 nt1.94□□□□□ -2.1
SMD1Q02260 GCD10YNL062C 1437 nt1.93□□□□□ -2.1
SMD1Q02260 tF(GAA)DtF(GAA)D 73 nt1.93□□□□□ -2.1
SMD1Q02260 tF(GAA)NtF(GAA)N 73 nt1.93□□□□□ -2.1
SMD1Q02260 PRE1YER012W 597 nt1.93□□□□□ -2.1
SMD1Q02260 RPL23BYER117W 414 nt1.93□□□□□ -2.1
SMD1Q02260 SUP56tL(CAA)A 82 nt1.93□□□□□ -2.1
SMD1Q02260 SUP53tL(CAA)C 82 nt1.93□□□□□ -2.1
SMD1Q02260 tL(CAA)DtL(CAA)D 82 nt1.93□□□□□ -2.1
SMD1Q02260 tL(CAA)G1tL(CAA)G1 82 nt1.93□□□□□ -2.1
SMD1Q02260 SUP54tL(CAA)G2 82 nt1.93□□□□□ -2.1
SMD1Q02260 tL(CAA)G3tL(CAA)G3 82 nt1.93□□□□□ -2.1
SMD1Q02260 tL(CAA)KtL(CAA)K 82 nt1.93□□□□□ -2.1
SMD1Q02260 tL(CAA)LtL(CAA)L 82 nt1.93□□□□□ -2.1
SMD1Q02260 tL(CAA)MtL(CAA)M 82 nt1.93□□□□□ -2.1
SMD1Q02260 tL(CAA)NtL(CAA)N 82 nt1.93□□□□□ -2.1
SMD1Q02260 MPO1YGL010W 525 nt1.93□□□□□ -2.1
SMD1Q02260 PRM8YGL053W 714 nt1.93□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 20.9 ms