Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 MSH2YOL090W 2895 nt4.02□□□□□ -1.77
UBP3Q01477 KHA1YJL094C 2622 nt4.02□□□□□ -1.77
UBP3Q01477 SET1YHR119W 3243 nt4.02□□□□□ -1.77
UBP3Q01477 YJR003CYJR003C 1560 nt4.02□□□□□ -1.77
UBP3Q01477 NOG1YPL093W 1944 nt4.01□□□□□ -1.77
UBP3Q01477 YNL193WYNL193W 1677 nt4.01□□□□□ -1.77
UBP3Q01477 XRS2YDR369C 2565 nt4.01□□□□□ -1.77
UBP3Q01477 AIP1YMR092C 1848 nt4.01□□□□□ -1.77
UBP3Q01477 YDL068WYDL068W 330 nt4.01□□□□□ -1.77
UBP3Q01477 RPB9YGL070C 369 nt4.01□□□□□ -1.77
UBP3Q01477 YGR051CYGR051C 324 nt4.01□□□□□ -1.77
UBP3Q01477 REC104YHR157W 549 nt4.01□□□□□ -1.77
UBP3Q01477 YLR154W-BYLR154W-B 165 nt4.01□□□□□ -1.77
UBP3Q01477 PFY1YOR122C 381 nt4.01□□□□□ -1.77
UBP3Q01477 DSF2YBR007C 2211 nt4.01□□□□□ -1.77
UBP3Q01477 YRR1YOR162C 2433 nt4□□□□□ -1.77 RIP-Chip
UBP3Q01477 SNA4YDL123W 423 nt4□□□□□ -1.77
UBP3Q01477 YFL032WYFL032W 321 nt4□□□□□ -1.77
UBP3Q01477 YGL165CYGL165C 579 nt4□□□□□ -1.77
UBP3Q01477 YPS5YGL259W 498 nt4□□□□□ -1.77
UBP3Q01477 SRL3YKR091W 741 nt4□□□□□ -1.77
UBP3Q01477 YMR294W-AYMR294W-A 360 nt4□□□□□ -1.77
UBP3Q01477 VPS3YDR495C 3036 nt4□□□□□ -1.77
UBP3Q01477 MNT3YIL014W 1893 nt4□□□□□ -1.77
UBP3Q01477 OSH6YKR003W 1347 nt3.99□□□□□ -1.77
UBP3Q01477 FKH2YNL068C 2589 nt3.99□□□□□ -1.77 RIP-Chip
UBP3Q01477 PMT6YGR199W 2280 nt3.99□□□□□ -1.77 RIP-Chip
UBP3Q01477 COX7YMR256C 183 nt3.99□□□□□ -1.77
UBP3Q01477 YGL140CYGL140C 3660 nt3.99□□□□□ -1.77
UBP3Q01477 SWI1YPL016W 3945 nt3.99□□□□□ -1.77
UBP3Q01477 RNH70YGR276C 1662 nt3.99□□□□□ -1.77
UBP3Q01477 ROY1YMR258C 1662 nt3.99□□□□□ -1.77
UBP3Q01477 STE5YDR103W 2754 nt3.98□□□□□ -1.77
UBP3Q01477 SRB4YER022W 2064 nt3.98□□□□□ -1.77
UBP3Q01477 RPL39YJL189W 156 nt3.98□□□□□ -1.77
UBP3Q01477 TIM18YOR297C 579 nt3.98□□□□□ -1.77
UBP3Q01477 NTC20YBR188C 423 nt3.98□□□□□ -1.77
UBP3Q01477 PCK1YKR097W 1650 nt3.97□□□□□ -1.77
UBP3Q01477 MYO5YMR109W 3660 nt3.97□□□□□ -1.77
UBP3Q01477 YGL042CYGL042C 306 nt3.97□□□□□ -1.77
UBP3Q01477 MYO3YKL129C 3819 nt3.97□□□□□ -1.77
UBP3Q01477 YOR146WYOR146W 306 nt3.97□□□□□ -1.77
UBP3Q01477 BNI4YNL233W 2679 nt3.97□□□□□ -1.77
UBP3Q01477 SMC2YFR031C 3513 nt3.96□□□□□ -1.77
UBP3Q01477 COP1YDL145C 3606 nt3.96□□□□□ -1.77
UBP3Q01477 IES6YEL044W 501 nt3.96□□□□□ -1.78
UBP3Q01477 YER038W-AYER038W-A 381 nt3.96□□□□□ -1.78
UBP3Q01477 YER107W-AYER107W-A 321 nt3.96□□□□□ -1.78
UBP3Q01477 YHR007C-AYHR007C-A 216 nt3.96□□□□□ -1.78
UBP3Q01477 URA10YMR271C 684 nt3.96□□□□□ -1.78
UBP3Q01477 PIS1YPR113W 663 nt3.96□□□□□ -1.78
UBP3Q01477 ZDS1YMR273C 2748 nt3.96□□□□□ -1.78
UBP3Q01477 FAS1YKL182W 6156 nt3.96□□□□□ -1.78
UBP3Q01477 MKT1YNL085W 2493 nt3.96□□□□□ -1.78
UBP3Q01477 RNR4YGR180C 1038 nt3.95□□□□□ -1.78
UBP3Q01477 HHT2YNL031C 411 nt3.95□□□□□ -1.78
UBP3Q01477 CDC45YLR103C 1953 nt3.94□□□□□ -1.78
UBP3Q01477 JJJ2YJL162C 1752 nt3.94□□□□□ -1.78
UBP3Q01477 RPS0AYGR214W 759 nt3.94□□□□□ -1.78
UBP3Q01477 SHE2YKL130C 741 nt3.94□□□□□ -1.78
UBP3Q01477 CWC24YLR323C 780 nt3.94□□□□□ -1.78
UBP3Q01477 ILV5YLR355C 1188 nt3.94□□□□□ -1.78 RIP-Chip
UBP3Q01477 IMP4YNL075W 873 nt3.94□□□□□ -1.78 RIP-Chip
UBP3Q01477 TSC3YBR058C-A 243 nt3.94□□□□□ -1.78
UBP3Q01477 SWH1YAR042W 3567 nt3.94□□□□□ -1.78 RIP-Chip
UBP3Q01477 YGR242WYGR242W 309 nt3.93□□□□□ -1.78
UBP3Q01477 COX19YLL018C-A 297 nt3.93□□□□□ -1.78
UBP3Q01477 YLR031WYLR031W 561 nt3.93□□□□□ -1.78
UBP3Q01477 RPL19BYBL027W 570 nt3.93□□□□□ -1.78
UBP3Q01477 HEF3YNL014W 3135 nt3.93□□□□□ -1.78
UBP3Q01477 CHD1YER164W 4407 nt3.93□□□□□ -1.78
UBP3Q01477 RSF2YJR127C 4143 nt3.92□□□□□ -1.78 RIP-Chip
UBP3Q01477 RAD26YJR035W 3258 nt3.92□□□□□ -1.78
UBP3Q01477 RDS1YCR106W 2499 nt3.92□□□□□ -1.78
UBP3Q01477 LSM8YJR022W 330 nt3.92□□□□□ -1.78
UBP3Q01477 MAL33YBR297W 1407 nt3.92□□□□□ -1.78 RIP-Chip
UBP3Q01477 SSP1YHR184W 1716 nt3.92□□□□□ -1.78
UBP3Q01477 NSP1YJL041W 2472 nt3.92□□□□□ -1.78
UBP3Q01477 SUP56tL(CAA)A 82 nt3.91□□□□□ -1.78
UBP3Q01477 SUP53tL(CAA)C 82 nt3.91□□□□□ -1.78
UBP3Q01477 tL(CAA)DtL(CAA)D 82 nt3.91□□□□□ -1.78
UBP3Q01477 tL(CAA)G1tL(CAA)G1 82 nt3.91□□□□□ -1.78
UBP3Q01477 SUP54tL(CAA)G2 82 nt3.91□□□□□ -1.78
UBP3Q01477 tL(CAA)G3tL(CAA)G3 82 nt3.91□□□□□ -1.78
UBP3Q01477 tL(CAA)KtL(CAA)K 82 nt3.91□□□□□ -1.78
UBP3Q01477 tL(CAA)LtL(CAA)L 82 nt3.91□□□□□ -1.78
UBP3Q01477 tL(CAA)MtL(CAA)M 82 nt3.91□□□□□ -1.78
UBP3Q01477 tL(CAA)NtL(CAA)N 82 nt3.91□□□□□ -1.78
UBP3Q01477 BLI1YKL061W 342 nt3.91□□□□□ -1.78 RIP-Chip
UBP3Q01477 YOR385WYOR385W 873 nt3.91□□□□□ -1.78
UBP3Q01477 YPL152W-AYPL152W-A 99 nt3.91□□□□□ -1.78
UBP3Q01477 snR36snR36 182 nt3.91□□□□□ -1.78
UBP3Q01477 ATP22YDR350C 2055 nt3.91□□□□□ -1.78
UBP3Q01477 UTP13YLR222C 2454 nt3.9□□□□□ -1.78
UBP3Q01477 DIE2YGR227W 1578 nt3.9□□□□□ -1.78
UBP3Q01477 STN1YDR082W 1485 nt3.9□□□□□ -1.79
UBP3Q01477 ATG26YLR189C 3597 nt3.9□□□□□ -1.79
UBP3Q01477 ELM1YKL048C 1923 nt3.89□□□□□ -1.79
UBP3Q01477 SIZ1YDR409W 2715 nt3.89□□□□□ -1.79
UBP3Q01477 YCK2YNL154C 1641 nt3.89□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 56.8 ms