Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.27■■□□□ 1
EIF3EP60228 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.27■■□□□ 1
EIF3EP60228 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.27■□□□□ 0.99
EIF3EP60228 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
EIF3EP60228 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.27■□□□□ 0.99
EIF3EP60228 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.26■□□□□ 0.99
EIF3EP60228 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
EIF3EP60228 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
EIF3EP60228 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
EIF3EP60228 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
EIF3EP60228 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
EIF3EP60228 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.26■□□□□ 0.99
EIF3EP60228 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
EIF3EP60228 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EIF3EP60228 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.26■□□□□ 0.99
EIF3EP60228 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.26■□□□□ 0.99
EIF3EP60228 SLC7A5P2-201ENST00000553010 536 ntBASIC21.26■□□□□ 0.99
EIF3EP60228 CCDC92B-201ENST00000575506 885 ntBASIC21.26■□□□□ 0.99
EIF3EP60228 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.26■□□□□ 0.99
EIF3EP60228 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.26■□□□□ 0.99
EIF3EP60228 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.26■□□□□ 0.99
EIF3EP60228 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EIF3EP60228 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EIF3EP60228 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.26■□□□□ 0.99
EIF3EP60228 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.26■□□□□ 0.99
EIF3EP60228 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EIF3EP60228 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EIF3EP60228 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EIF3EP60228 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.26■□□□□ 0.99
EIF3EP60228 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
EIF3EP60228 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EIF3EP60228 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.25■□□□□ 0.99
EIF3EP60228 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EIF3EP60228 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.25■□□□□ 0.99
EIF3EP60228 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
EIF3EP60228 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.25■□□□□ 0.99
EIF3EP60228 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
EIF3EP60228 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.25■□□□□ 0.99
EIF3EP60228 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
EIF3EP60228 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.25■□□□□ 0.99
EIF3EP60228 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.25■□□□□ 0.99
EIF3EP60228 ZNRF2P3-201ENST00000424200 374 ntBASIC21.25■□□□□ 0.99
EIF3EP60228 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
EIF3EP60228 KRT18P14-201ENST00000534205 1250 ntBASIC21.25■□□□□ 0.99
EIF3EP60228 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EIF3EP60228 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.25■□□□□ 0.99
EIF3EP60228 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.25■□□□□ 0.99
EIF3EP60228 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EIF3EP60228 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
EIF3EP60228 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.25■□□□□ 0.99
EIF3EP60228 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
EIF3EP60228 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EIF3EP60228 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EIF3EP60228 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
EIF3EP60228 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EIF3EP60228 AC020907.5-201ENST00000624372 1936 ntBASIC21.24■□□□□ 0.99
EIF3EP60228 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.24■□□□□ 0.99
EIF3EP60228 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.24■□□□□ 0.99
EIF3EP60228 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.24■□□□□ 0.99
EIF3EP60228 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.24■□□□□ 0.99
EIF3EP60228 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
EIF3EP60228 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EIF3EP60228 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
EIF3EP60228 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EIF3EP60228 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EIF3EP60228 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EIF3EP60228 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EIF3EP60228 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EIF3EP60228 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EIF3EP60228 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
EIF3EP60228 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EIF3EP60228 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.23■□□□□ 0.99
EIF3EP60228 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EIF3EP60228 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
EIF3EP60228 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EIF3EP60228 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.23■□□□□ 0.99
EIF3EP60228 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.23■□□□□ 0.99
EIF3EP60228 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.23■□□□□ 0.99
EIF3EP60228 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.23■□□□□ 0.99
EIF3EP60228 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EIF3EP60228 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.23■□□□□ 0.99
EIF3EP60228 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.23■□□□□ 0.99
EIF3EP60228 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
EIF3EP60228 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EIF3EP60228 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EIF3EP60228 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EIF3EP60228 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EIF3EP60228 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.22■□□□□ 0.99
EIF3EP60228 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.22■□□□□ 0.99
EIF3EP60228 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.22■□□□□ 0.99
EIF3EP60228 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EIF3EP60228 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
EIF3EP60228 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EIF3EP60228 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EIF3EP60228 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
EIF3EP60228 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EIF3EP60228 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
EIF3EP60228 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.22■□□□□ 0.99
EIF3EP60228 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.22■□□□□ 0.99
EIF3EP60228 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms