Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN12P56749 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN12P56749 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN12P56749 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLDN12P56749 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.9■□□□□ 0.46
CLDN12P56749 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN12P56749 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CLDN12P56749 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN12P56749 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN12P56749 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
CLDN12P56749 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.89■□□□□ 0.46
CLDN12P56749 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLDN12P56749 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CLDN12P56749 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLDN12P56749 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN12P56749 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CLDN12P56749 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN12P56749 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.89■□□□□ 0.45
CLDN12P56749 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN12P56749 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.89■□□□□ 0.45
CLDN12P56749 AC136469.2-201ENST00000623944 1028 ntBASIC17.89■□□□□ 0.45
CLDN12P56749 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN12P56749 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN12P56749 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN12P56749 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.89■□□□□ 0.45
CLDN12P56749 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN12P56749 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN12P56749 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CLDN12P56749 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN12P56749 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLDN12P56749 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN12P56749 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN12P56749 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLDN12P56749 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN12P56749 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN12P56749 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN12P56749 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN12P56749 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.88■□□□□ 0.45
CLDN12P56749 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.88■□□□□ 0.45
CLDN12P56749 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDN12P56749 AL138724.1-201ENST00000606771 1088 ntBASIC17.88■□□□□ 0.45
CLDN12P56749 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDN12P56749 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLDN12P56749 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN12P56749 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN12P56749 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN12P56749 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN12P56749 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CLDN12P56749 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN12P56749 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN12P56749 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN12P56749 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN12P56749 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN12P56749 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN12P56749 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN12P56749 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN12P56749 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN12P56749 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN12P56749 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN12P56749 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN12P56749 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN12P56749 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN12P56749 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN12P56749 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN12P56749 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN12P56749 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CLDN12P56749 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN12P56749 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN12P56749 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CLDN12P56749 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CLDN12P56749 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN12P56749 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN12P56749 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
CLDN12P56749 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLDN12P56749 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN12P56749 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLDN12P56749 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.86■□□□□ 0.45
CLDN12P56749 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLDN12P56749 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLDN12P56749 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CLDN12P56749 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN12P56749 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLDN12P56749 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN12P56749 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.86■□□□□ 0.45
CLDN12P56749 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CLDN12P56749 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.86■□□□□ 0.45
CLDN12P56749 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
CLDN12P56749 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN12P56749 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN12P56749 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CLDN12P56749 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN12P56749 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLDN12P56749 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN12P56749 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
CLDN12P56749 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.86■□□□□ 0.45
CLDN12P56749 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN12P56749 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN12P56749 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN12P56749 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN12P56749 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms