Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN8P56748 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN8P56748 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN8P56748 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CLDN8P56748 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN8P56748 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN8P56748 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN8P56748 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN8P56748 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN8P56748 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN8P56748 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN8P56748 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CLDN8P56748 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
CLDN8P56748 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN8P56748 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CLDN8P56748 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN8P56748 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN8P56748 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN8P56748 AL512408.1-201ENST00000569378 2000 ntBASIC19.61■□□□□ 0.73
CLDN8P56748 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN8P56748 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CLDN8P56748 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN8P56748 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN8P56748 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN8P56748 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN8P56748 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN8P56748 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN8P56748 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN8P56748 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CLDN8P56748 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CLDN8P56748 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN8P56748 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN8P56748 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN8P56748 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN8P56748 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN8P56748 AC245052.3-201ENST00000450182 901 ntBASIC19.6■□□□□ 0.73
CLDN8P56748 AC010141.2-201ENST00000452426 721 ntBASIC19.6■□□□□ 0.73
CLDN8P56748 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN8P56748 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN8P56748 AC005837.3-201ENST00000612163 286 ntBASIC19.6■□□□□ 0.73
CLDN8P56748 AC120498.10-201ENST00000621827 505 ntBASIC19.6■□□□□ 0.73
CLDN8P56748 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN8P56748 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN8P56748 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN8P56748 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN8P56748 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN8P56748 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN8P56748 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN8P56748 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN8P56748 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN8P56748 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN8P56748 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN8P56748 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN8P56748 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLDN8P56748 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN8P56748 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN8P56748 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CLDN8P56748 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.59■□□□□ 0.73
CLDN8P56748 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN8P56748 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLDN8P56748 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CLDN8P56748 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN8P56748 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN8P56748 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN8P56748 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN8P56748 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN8P56748 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLDN8P56748 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN8P56748 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN8P56748 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN8P56748 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.58■□□□□ 0.73
CLDN8P56748 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN8P56748 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN8P56748 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN8P56748 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.58■□□□□ 0.73
CLDN8P56748 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.58■□□□□ 0.73
CLDN8P56748 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN8P56748 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.58■□□□□ 0.72
CLDN8P56748 AC105265.2-201ENST00000467189 838 ntBASIC19.58■□□□□ 0.72
CLDN8P56748 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN8P56748 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CLDN8P56748 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN8P56748 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.58■□□□□ 0.72
CLDN8P56748 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN8P56748 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN8P56748 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN8P56748 LINC02228-203ENST00000641970 1355 ntBASIC19.57■□□□□ 0.72
CLDN8P56748 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN8P56748 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN8P56748 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN8P56748 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN8P56748 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN8P56748 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CLDN8P56748 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN8P56748 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CLDN8P56748 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN8P56748 AL121603.2-201ENST00000557373 2117 ntBASIC19.57■□□□□ 0.72
CLDN8P56748 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN8P56748 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLDN8P56748 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms