Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.71■□□□□ 0.59
SUMO3P55854 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.71■□□□□ 0.59
SUMO3P55854 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.71■□□□□ 0.59
SUMO3P55854 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.71■□□□□ 0.59
SUMO3P55854 AC069236.1-201ENST00000604339 616 ntBASIC18.71■□□□□ 0.59
SUMO3P55854 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SUMO3P55854 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUMO3P55854 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUMO3P55854 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SUMO3P55854 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUMO3P55854 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUMO3P55854 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUMO3P55854 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUMO3P55854 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUMO3P55854 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.71■□□□□ 0.59
SUMO3P55854 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SUMO3P55854 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SUMO3P55854 AC027702.1-201ENST00000563810 1770 ntBASIC18.7■□□□□ 0.58
SUMO3P55854 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SUMO3P55854 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SUMO3P55854 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SUMO3P55854 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SUMO3P55854 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SUMO3P55854 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SUMO3P55854 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SUMO3P55854 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SUMO3P55854 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SUMO3P55854 CYP2T1P-201ENST00000432607 1285 ntBASIC18.7■□□□□ 0.58
SUMO3P55854 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.7■□□□□ 0.58
SUMO3P55854 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SUMO3P55854 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.7■□□□□ 0.58
SUMO3P55854 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
SUMO3P55854 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.7■□□□□ 0.58
SUMO3P55854 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SUMO3P55854 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SUMO3P55854 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SUMO3P55854 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SUMO3P55854 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SUMO3P55854 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SUMO3P55854 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SUMO3P55854 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SUMO3P55854 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.69■□□□□ 0.58
SUMO3P55854 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SUMO3P55854 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.69■□□□□ 0.58
SUMO3P55854 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.69■□□□□ 0.58
SUMO3P55854 RARRES2P4-201ENST00000514074 484 ntBASIC18.69■□□□□ 0.58
SUMO3P55854 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.69■□□□□ 0.58
SUMO3P55854 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SUMO3P55854 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SUMO3P55854 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.69■□□□□ 0.58
SUMO3P55854 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SUMO3P55854 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SUMO3P55854 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.69■□□□□ 0.58
SUMO3P55854 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.69■□□□□ 0.58
SUMO3P55854 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SUMO3P55854 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SUMO3P55854 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SUMO3P55854 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SUMO3P55854 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SUMO3P55854 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SUMO3P55854 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SUMO3P55854 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SUMO3P55854 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SUMO3P55854 PGM5P4-201ENST00000421970 445 ntBASIC18.68■□□□□ 0.58
SUMO3P55854 CDCA4P2-201ENST00000441182 718 ntBASIC18.68■□□□□ 0.58
SUMO3P55854 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.68■□□□□ 0.58
SUMO3P55854 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.68■□□□□ 0.58
SUMO3P55854 AC005181.1-201ENST00000604782 1256 ntBASIC18.68■□□□□ 0.58
SUMO3P55854 AC092666.2-201ENST00000613287 246 ntBASIC18.68■□□□□ 0.58
SUMO3P55854 AC100791.3-201ENST00000617619 330 ntBASIC18.68■□□□□ 0.58
SUMO3P55854 AC008694.1-202ENST00000636953 945 ntBASIC18.68■□□□□ 0.58
SUMO3P55854 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SUMO3P55854 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SUMO3P55854 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SUMO3P55854 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SUMO3P55854 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SUMO3P55854 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SUMO3P55854 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
SUMO3P55854 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.68■□□□□ 0.58
SUMO3P55854 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SUMO3P55854 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SUMO3P55854 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SUMO3P55854 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SUMO3P55854 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.68■□□□□ 0.58
SUMO3P55854 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SUMO3P55854 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SUMO3P55854 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SUMO3P55854 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SUMO3P55854 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.67■□□□□ 0.58
SUMO3P55854 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SUMO3P55854 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SUMO3P55854 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SUMO3P55854 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SUMO3P55854 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SUMO3P55854 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SUMO3P55854 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.67■□□□□ 0.58
SUMO3P55854 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.67■□□□□ 0.58
SUMO3P55854 AC026185.1-201ENST00000445748 174 ntBASIC18.67■□□□□ 0.58
SUMO3P55854 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.67■□□□□ 0.58
SUMO3P55854 AC016405.3-201ENST00000607710 860 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms