Protein–RNA interactions for Protein: P52286

SKP1, Suppressor of kinetochore protein 1, yeast

Predictions only

Length 194 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	P52286	PHS1	YJL097W	654 nt		4.09	□□□□□ -1.75
SKP1	P52286	PAU23	YLR037C	375 nt		4.09	□□□□□ -1.75
SKP1	P52286	KAP114	YGL241W	3015 nt		4.09	□□□□□ -1.75
SKP1	P52286	ALG8	YOR067C	1734 nt		4.09	□□□□□ -1.76
SKP1	P52286	PFK1	YGR240C	2964 nt		4.08	□□□□□ -1.76
SKP1	P52286	VIP1	YLR410W	3441 nt		4.08	□□□□□ -1.76
SKP1	P52286	ECM16	YMR128W	3804 nt		4.08	□□□□□ -1.76
SKP1	P52286	HTL1	YCR020W-B	237 nt		4.08	□□□□□ -1.76
SKP1	P52286	RAD61	YDR014W	1944 nt		4.08	□□□□□ -1.76
SKP1	P52286	GPI1	YGR216C	1830 nt		4.08	□□□□□ -1.76
SKP1	P52286	NUP85	YJR042W	2235 nt		4.07	□□□□□ -1.76
SKP1	P52286	BUD5	YCR038C	1929 nt		4.07	□□□□□ -1.76
SKP1	P52286	CBP2	YHL038C	1893 nt		4.07	□□□□□ -1.76
SKP1	P52286	VPS73	YGL104C	1461 nt		4.07	□□□□□ -1.76
SKP1	P52286	STE14	YDR410C	720 nt		4.07	□□□□□ -1.76
SKP1	P52286	RPS22B	YLR367W	393 nt		4.07	□□□□□ -1.76
SKP1	P52286	SSO1	YPL232W	873 nt		4.07	□□□□□ -1.76
SKP1	P52286	YBR064W	YBR064W	429 nt		4.07	□□□□□ -1.76
SKP1	P52286	YHR078W	YHR078W	1659 nt		4.06	□□□□□ -1.76
SKP1	P52286	NUP60	YAR002W	1620 nt		4.06	□□□□□ -1.76
SKP1	P52286	FUS1	YCL027W	1539 nt		4.06	□□□□□ -1.76
SKP1	P52286	BNA4	YBL098W	1383 nt		4.06	□□□□□ -1.76
SKP1	P52286	RPS13	YDR064W	456 nt		4.06	□□□□□ -1.76
SKP1	P52286	DAD4	YDR320C-A	219 nt		4.06	□□□□□ -1.76
SKP1	P52286	RPL40A	YIL148W	387 nt		4.06	□□□□□ -1.76
SKP1	P52286	YOR008C-A	YOR008C-A	225 nt		4.06	□□□□□ -1.76
SKP1	P52286	UPC2	YDR213W	2742 nt		4.06	□□□□□ -1.76
SKP1	P52286	COX1	Q0045	1605 nt		4.06	□□□□□ -1.76
SKP1	P52286	APC1	YNL172W	5247 nt		4.05	□□□□□ -1.76
SKP1	P52286	RIP1	YEL024W	648 nt		4.05	□□□□□ -1.76
SKP1	P52286	AIP1	YMR092C	1848 nt		4.05	□□□□□ -1.76
SKP1	P52286	YMR196W	YMR196W	3267 nt		4.04	□□□□□ -1.76
SKP1	P52286	FRE8	YLR047C	2061 nt		4.04	□□□□□ -1.76
SKP1	P52286	tK(CUU)C	tK(CUU)C	73 nt		4.04	□□□□□ -1.76
SKP1	P52286	tK(CUU)D1	tK(CUU)D1	73 nt		4.04	□□□□□ -1.76
SKP1	P52286	tK(CUU)D2	tK(CUU)D2	73 nt		4.04	□□□□□ -1.76
SKP1	P52286	tK(CUU)E1	tK(CUU)E1	73 nt		4.04	□□□□□ -1.76
SKP1	P52286	tK(CUU)E2	tK(CUU)E2	73 nt		4.04	□□□□□ -1.76
SKP1	P52286	tK(CUU)F	tK(CUU)F	73 nt		4.04	□□□□□ -1.76
SKP1	P52286	tK(CUU)G1	tK(CUU)G1	73 nt		4.04	□□□□□ -1.76
SKP1	P52286	tK(CUU)G2	tK(CUU)G2	73 nt		4.04	□□□□□ -1.76
SKP1	P52286	tK(CUU)G3	tK(CUU)G3	73 nt		4.04	□□□□□ -1.76
SKP1	P52286	tK(CUU)I	tK(CUU)I	73 nt		4.04	□□□□□ -1.76
SKP1	P52286	tK(CUU)J	tK(CUU)J	73 nt		4.04	□□□□□ -1.76
SKP1	P52286	tK(CUU)K	tK(CUU)K	73 nt		4.04	□□□□□ -1.76
SKP1	P52286	tK(CUU)M	tK(CUU)M	73 nt		4.04	□□□□□ -1.76
SKP1	P52286	tK(CUU)P	tK(CUU)P	73 nt		4.04	□□□□□ -1.76
SKP1	P52286	YLR342W-A	YLR342W-A	174 nt		4.04	□□□□□ -1.76
SKP1	P52286	TAF5	YBR198C	2397 nt		4.04	□□□□□ -1.76
SKP1	P52286	SGO1	YOR073W	1773 nt		4.04	□□□□□ -1.76
SKP1	P52286	AIM21	YIR003W	2040 nt		4.04	□□□□□ -1.76
SKP1	P52286	MPS1	YDL028C	2295 nt		4.04	□□□□□ -1.76
SKP1	P52286	TUB2	YFL037W	1374 nt		4.03	□□□□□ -1.76
SKP1	P52286	VPS41	YDR080W	2979 nt		4.03	□□□□□ -1.76
SKP1	P52286	KIN4	YOR233W	2403 nt		4.03	□□□□□ -1.76
SKP1	P52286	NAN1	YPL126W	2691 nt		4.03	□□□□□ -1.76
SKP1	P52286	YDR048C	YDR048C	315 nt		4.03	□□□□□ -1.76
SKP1	P52286	GPP1	YIL053W	753 nt		4.03	□□□□□ -1.76
SKP1	P52286	YBL006W-A	YBL006W-A	150 nt		4.03	□□□□□ -1.76
SKP1	P52286	YBR137W	YBR137W	540 nt		4.03	□□□□□ -1.76
SKP1	P52286	snR48	snR48	113 nt		4.03	□□□□□ -1.76
SKP1	P52286	VID22	YLR373C	2706 nt		4.03	□□□□□ -1.76
SKP1	P52286	RAD54	YGL163C	2697 nt		4.03	□□□□□ -1.76
SKP1	P52286	DBP6	YNR038W	1890 nt		4.03	□□□□□ -1.77
SKP1	P52286	GMC1	YDR506C	1827 nt		4.02	□□□□□ -1.77
SKP1	P52286	JJJ2	YJL162C	1752 nt		4.02	□□□□□ -1.77
SKP1	P52286	snR55	snR55	98 nt		4.02	□□□□□ -1.77
SKP1	P52286	CSN9	YDR179C	489 nt		4.02	□□□□□ -1.77
SKP1	P52286	SPC19	YDR201W	498 nt		4.02	□□□□□ -1.77
SKP1	P52286	YOR072W-A	YOR072W-A	249 nt		4.02	□□□□□ -1.77
SKP1	P52286	YPR169W-A	YPR169W-A	219 nt		4.02	□□□□□ -1.77
SKP1	P52286	YPR170W-B	YPR170W-B	258 nt		4.02	□□□□□ -1.77
SKP1	P52286	SSB1	YDL229W	1842 nt		4.02	□□□□□ -1.77
SKP1	P52286	NPR2	YEL062W	1848 nt		4.02	□□□□□ -1.77
SKP1	P52286	SSB2	YNL209W	1842 nt		4.02	□□□□□ -1.77
SKP1	P52286	REV1	YOR346W	2958 nt		4.02	□□□□□ -1.77
SKP1	P52286	MVP1	YMR004W	1536 nt		4.01	□□□□□ -1.77
SKP1	P52286	MZM1	YDR493W	372 nt		4.01	□□□□□ -1.77
SKP1	P52286	YDR545C-A	YDR545C-A	480 nt		4.01	□□□□□ -1.77
SKP1	P52286	COX18	YGR062C	951 nt		4.01	□□□□□ -1.77
SKP1	P52286	RPL14B	YHL001W	417 nt		4.01	□□□□□ -1.77
SKP1	P52286	tT(UGU)Q1	tT(UGU)Q1	76 nt		4.01	□□□□□ -1.77
SKP1	P52286	YJL150W	YJL150W	303 nt		4.01	□□□□□ -1.77
SKP1	P52286	KGD1	YIL125W	3045 nt		4.01	□□□□□ -1.77
SKP1	P52286	SLP1	YOR154W	1764 nt		4.01	□□□□□ -1.77
SKP1	P52286	SCW11	YGL028C	1629 nt		4	□□□□□ -1.77
SKP1	P52286	VPS52	YDR484W	1926 nt		4	□□□□□ -1.77
SKP1	P52286	YDL011C	YDL011C	324 nt		4	□□□□□ -1.77
SKP1	P52286	SPI1	YER150W	447 nt		4	□□□□□ -1.77
SKP1	P52286	YGR174W-A	YGR174W-A	87 nt		4	□□□□□ -1.77
SKP1	P52286	YAR019W-A	YAR019W-A	333 nt		4	□□□□□ -1.77
SKP1	P52286	MF(ALPHA)1	YPL187W	498 nt		4	□□□□□ -1.77
SKP1	P52286	AKL1	YBR059C	3327 nt		4	□□□□□ -1.77
SKP1	P52286	CCT7	YJL111W	1653 nt		4	□□□□□ -1.77
SKP1	P52286	TIM8	YJR135W-A	264 nt		3.99	□□□□□ -1.77
SKP1	P52286	YKL156C-A	YKL156C-A	117 nt		3.99	□□□□□ -1.77
SKP1	P52286	YMR194C-A	YMR194C-A	225 nt		3.99	□□□□□ -1.77
SKP1	P52286	YMR230W-A	YMR230W-A	189 nt		3.99	□□□□□ -1.77
SKP1	P52286	PDR5	YOR153W	4536 nt		3.99	□□□□□ -1.77
SKP1	P52286	EGT2	YNL327W	3126 nt		3.99	□□□□□ -1.77

Retrieved 100 of 7,029 protein–RNA pairs in 74.7 ms