Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.48■□□□□ 0.55
LHX2P50458 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LHX2P50458 AL049796.1-201ENST00000565336 1766 ntBASIC18.48■□□□□ 0.55
LHX2P50458 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LHX2P50458 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
LHX2P50458 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LHX2P50458 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LHX2P50458 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
LHX2P50458 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LHX2P50458 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LHX2P50458 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LHX2P50458 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LHX2P50458 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LHX2P50458 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LHX2P50458 DUSP5P2-201ENST00000426873 1033 ntBASIC18.48■□□□□ 0.55
LHX2P50458 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
LHX2P50458 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.48■□□□□ 0.55
LHX2P50458 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.48■□□□□ 0.55
LHX2P50458 AC091874.3-201ENST00000512672 1195 ntBASIC18.48■□□□□ 0.55
LHX2P50458 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.48■□□□□ 0.55
LHX2P50458 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LHX2P50458 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LHX2P50458 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.48■□□□□ 0.55
LHX2P50458 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.48■□□□□ 0.55
LHX2P50458 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LHX2P50458 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LHX2P50458 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LHX2P50458 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LHX2P50458 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LHX2P50458 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LHX2P50458 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LHX2P50458 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.47■□□□□ 0.55
LHX2P50458 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LHX2P50458 KRT18P68-201ENST00000392293 1000 ntBASIC18.47■□□□□ 0.55
LHX2P50458 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.47■□□□□ 0.55
LHX2P50458 CD99P1-205ENST00000527459 561 ntBASIC18.47■□□□□ 0.55
LHX2P50458 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.47■□□□□ 0.55
LHX2P50458 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.47■□□□□ 0.55
LHX2P50458 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
LHX2P50458 FEM1AP4-201ENST00000443167 1987 ntBASIC18.47■□□□□ 0.55
LHX2P50458 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LHX2P50458 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.47■□□□□ 0.55
LHX2P50458 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.47■□□□□ 0.55
LHX2P50458 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LHX2P50458 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.47■□□□□ 0.55
LHX2P50458 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
LHX2P50458 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.46■□□□□ 0.55
LHX2P50458 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.46■□□□□ 0.55
LHX2P50458 AC011484.1-201ENST00000377652 1995 ntBASIC18.46■□□□□ 0.55
LHX2P50458 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.46■□□□□ 0.55
LHX2P50458 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
LHX2P50458 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LHX2P50458 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.46■□□□□ 0.55
LHX2P50458 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LHX2P50458 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LHX2P50458 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LHX2P50458 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LHX2P50458 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LHX2P50458 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LHX2P50458 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LHX2P50458 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LHX2P50458 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LHX2P50458 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.46■□□□□ 0.55
LHX2P50458 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.46■□□□□ 0.55
LHX2P50458 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.46■□□□□ 0.55
LHX2P50458 AC097658.1-201ENST00000475555 843 ntBASIC18.46■□□□□ 0.55
LHX2P50458 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.46■□□□□ 0.55
LHX2P50458 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.46■□□□□ 0.55
LHX2P50458 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.46■□□□□ 0.55
LHX2P50458 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LHX2P50458 AC083880.1-201ENST00000608266 535 ntBASIC18.46■□□□□ 0.55
LHX2P50458 AL589743.5-201ENST00000616611 1050 ntBASIC18.46■□□□□ 0.55
LHX2P50458 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LHX2P50458 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LHX2P50458 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LHX2P50458 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.46■□□□□ 0.55
LHX2P50458 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LHX2P50458 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.46■□□□□ 0.55
LHX2P50458 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
LHX2P50458 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.46■□□□□ 0.54
LHX2P50458 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.45■□□□□ 0.54
LHX2P50458 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LHX2P50458 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LHX2P50458 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LHX2P50458 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LHX2P50458 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.45■□□□□ 0.54
LHX2P50458 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LHX2P50458 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LHX2P50458 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.45■□□□□ 0.54
LHX2P50458 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.45■□□□□ 0.54
LHX2P50458 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LHX2P50458 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.45■□□□□ 0.54
LHX2P50458 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LHX2P50458 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.45■□□□□ 0.54
LHX2P50458 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LHX2P50458 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LHX2P50458 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LHX2P50458 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LHX2P50458 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.45■□□□□ 0.54
LHX2P50458 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms