Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC34P49427 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.26■□□□□ 0.19
CDC34P49427 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC34P49427 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC34P49427 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CDC34P49427 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.26■□□□□ 0.19
CDC34P49427 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDC34P49427 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC34P49427 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC34P49427 FP700111.2-201ENST00000619190 1892 ntBASIC16.26■□□□□ 0.19
CDC34P49427 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC34P49427 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
CDC34P49427 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CDC34P49427 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC34P49427 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDC34P49427 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC34P49427 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC34P49427 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDC34P49427 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDC34P49427 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC34P49427 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDC34P49427 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CDC34P49427 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC34P49427 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDC34P49427 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
CDC34P49427 AC006455.2-201ENST00000429931 906 ntBASIC16.25■□□□□ 0.19
CDC34P49427 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.25■□□□□ 0.19
CDC34P49427 KRT125P-201ENST00000546827 989 ntBASIC16.25■□□□□ 0.19
CDC34P49427 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC34P49427 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.25■□□□□ 0.19
CDC34P49427 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDC34P49427 HCG11-201ENST00000411553 5696 ntBASIC16.25■□□□□ 0.19
CDC34P49427 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CDC34P49427 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC34P49427 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDC34P49427 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDC34P49427 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDC34P49427 AC018445.3-201ENST00000624177 1945 ntBASIC16.25■□□□□ 0.19
CDC34P49427 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC34P49427 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.25■□□□□ 0.19
CDC34P49427 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC34P49427 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC34P49427 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC34P49427 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC34P49427 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDC34P49427 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.24■□□□□ 0.19
CDC34P49427 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDC34P49427 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC34P49427 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDC34P49427 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC34P49427 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC34P49427 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC34P49427 AC010997.5-201ENST00000609182 354 ntBASIC16.24■□□□□ 0.19
CDC34P49427 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC34P49427 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC34P49427 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC34P49427 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC34P49427 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CDC34P49427 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDC34P49427 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
CDC34P49427 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC34P49427 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC34P49427 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC34P49427 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC34P49427 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC34P49427 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDC34P49427 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CDC34P49427 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC34P49427 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDC34P49427 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDC34P49427 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.23■□□□□ 0.19
CDC34P49427 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDC34P49427 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC34P49427 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CDC34P49427 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC34P49427 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDC34P49427 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CDC34P49427 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC34P49427 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.23■□□□□ 0.19
CDC34P49427 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC34P49427 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC34P49427 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.23■□□□□ 0.19
CDC34P49427 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC34P49427 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC34P49427 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC34P49427 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
CDC34P49427 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC34P49427 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC34P49427 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC34P49427 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC34P49427 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC34P49427 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC34P49427 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC34P49427 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC34P49427 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC34P49427 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC34P49427 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CDC34P49427 BX323043.1-201ENST00000641006 1765 ntBASIC16.22■□□□□ 0.19
CDC34P49427 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC34P49427 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms