Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 YHR212CYHR212C 336 nt1.85□□□□□ -2.11
LSM4P40070 SEC28YIL076W 891 nt1.85□□□□□ -2.11
LSM4P40070 YKL065W-AYKL065W-A 222 nt1.85□□□□□ -2.11
LSM4P40070 NYV1YLR093C 762 nt1.85□□□□□ -2.11
LSM4P40070 YLR154W-AYLR154W-A 186 nt1.85□□□□□ -2.11
LSM4P40070 YAR060CYAR060C 336 nt1.85□□□□□ -2.11
LSM4P40070 YLR307C-AYLR307C-A 264 nt1.85□□□□□ -2.11
LSM4P40070 YNL319WYNL319W 441 nt1.85□□□□□ -2.11
LSM4P40070 ESF2YNR054C 951 nt1.85□□□□□ -2.11
LSM4P40070 CUP9YPL177C 921 nt1.85□□□□□ -2.11
LSM4P40070 PEX8YGR077C 1770 nt1.85□□□□□ -2.11
LSM4P40070 NCS2YNL119W 1482 nt1.84□□□□□ -2.11
LSM4P40070 YDL118WYDL118W 381 nt1.84□□□□□ -2.11
LSM4P40070 TVP15YDR100W 432 nt1.84□□□□□ -2.11
LSM4P40070 CBS2YDR197W 1170 nt1.84□□□□□ -2.11
LSM4P40070 HTB1YDR224C 396 nt1.84□□□□□ -2.11
LSM4P40070 COG7YGL005C 840 nt1.84□□□□□ -2.11
LSM4P40070 COX6YHR051W 447 nt1.84□□□□□ -2.11
LSM4P40070 YKL069WYKL069W 543 nt1.84□□□□□ -2.11
LSM4P40070 RNP1YLL046C 750 nt1.84□□□□□ -2.11
LSM4P40070 ARC18YLR370C 537 nt1.84□□□□□ -2.11
LSM4P40070 RGM1YMR182C 636 nt1.84□□□□□ -2.11
LSM4P40070 YPR014CYPR014C 330 nt1.84□□□□□ -2.11
LSM4P40070 snR191snR191 274 nt1.84□□□□□ -2.11
LSM4P40070 DIS3YOL021C 3006 nt1.84□□□□□ -2.12
LSM4P40070 TOR2YKL203C 7425 nt1.84□□□□□ -2.12
LSM4P40070 RGA2YDR379W 3030 nt1.83□□□□□ -2.12
LSM4P40070 JJJ2YJL162C 1752 nt1.83□□□□□ -2.12
LSM4P40070 CBF2YGR140W 2871 nt1.83□□□□□ -2.12
LSM4P40070 DAD4YDR320C-A 219 nt1.83□□□□□ -2.12
LSM4P40070 MAM1YER106W 909 nt1.83□□□□□ -2.12
LSM4P40070 SEC4YFL005W 648 nt1.83□□□□□ -2.12
LSM4P40070 YMR31YFR049W 372 nt1.83□□□□□ -2.12
LSM4P40070 YGL230CYGL230C 444 nt1.83□□□□□ -2.12
LSM4P40070 RFC5YBR087W 1065 nt1.83□□□□□ -2.12
LSM4P40070 SYO1YDL063C 1863 nt1.82□□□□□ -2.12
LSM4P40070 UTP5YDR398W 1932 nt1.82□□□□□ -2.12
LSM4P40070 CWC23YGL128C 852 nt1.82□□□□□ -2.12
LSM4P40070 RSM27YGR215W 333 nt1.82□□□□□ -2.12
LSM4P40070 YIL012WYIL012W 342 nt1.82□□□□□ -2.12
LSM4P40070 HUA2YOR284W 732 nt1.82□□□□□ -2.12
LSM4P40070 SLM4YBR077C 489 nt1.82□□□□□ -2.12
LSM4P40070 TRM82YDR165W 1335 nt1.82□□□□□ -2.12
LSM4P40070 YBL005W-AYBL005W-A 1323 nt1.82□□□□□ -2.12
LSM4P40070 YMR046CYMR046C 1323 nt1.82□□□□□ -2.12
LSM4P40070 MDM36YPR083W 1740 nt1.82□□□□□ -2.12
LSM4P40070 YJL049WYJL049W 1353 nt1.82□□□□□ -2.12
LSM4P40070 Q0255Q0255 1419 nt1.82□□□□□ -2.12
LSM4P40070 ARP7YPR034W 1434 nt1.82□□□□□ -2.12
LSM4P40070 FUS1YCL027W 1539 nt1.81□□□□□ -2.12
LSM4P40070 FKS1YLR342W 5631 nt1.81□□□□□ -2.12
LSM4P40070 TFC3YAL001C 3483 nt1.81□□□□□ -2.12
LSM4P40070 PIG2YIL045W 1617 nt1.81□□□□□ -2.12
LSM4P40070 MGM1YOR211C 2646 nt1.81□□□□□ -2.12
LSM4P40070 PCK1YKR097W 1650 nt1.81□□□□□ -2.12
LSM4P40070 GIS1YDR096W 2685 nt1.81□□□□□ -2.12
LSM4P40070 COS111YBR203W 2775 nt1.81□□□□□ -2.12
LSM4P40070 YPD1YDL235C 504 nt1.81□□□□□ -2.12
LSM4P40070 GCN4YEL009C 846 nt1.81□□□□□ -2.12
LSM4P40070 ACB1YGR037C 264 nt1.81□□□□□ -2.12
LSM4P40070 IKI1YHR187W 930 nt1.81□□□□□ -2.12
LSM4P40070 CTK2YJL006C 972 nt1.81□□□□□ -2.12
LSM4P40070 RPS30AYLR287C-A 192 nt1.81□□□□□ -2.12
LSM4P40070 IPP1YBR011C 864 nt1.81□□□□□ -2.12
LSM4P40070 SAG1YJR004C 1953 nt1.81□□□□□ -2.12
LSM4P40070 CST9YLR394W 1449 nt1.81□□□□□ -2.12
LSM4P40070 YFR016CYFR016C 3702 nt1.81□□□□□ -2.12
LSM4P40070 UFD4YKL010C 4452 nt1.8□□□□□ -2.12
LSM4P40070 ATP16YDL004W 483 nt1.8□□□□□ -2.12
LSM4P40070 NRG1YDR043C 696 nt1.8□□□□□ -2.12
LSM4P40070 ATC1YDR184C 885 nt1.8□□□□□ -2.12
LSM4P40070 YFL015CYFL015C 495 nt1.8□□□□□ -2.12
LSM4P40070 YHL048C-AYHL048C-A 135 nt1.8□□□□□ -2.12
LSM4P40070 VMA10YHR039C-A 345 nt1.8□□□□□ -2.12
LSM4P40070 SUI2YJR007W 915 nt1.8□□□□□ -2.12
LSM4P40070 YLR224WYLR224W 1110 nt1.8□□□□□ -2.12
LSM4P40070 FAR3YMR052W 615 nt1.8□□□□□ -2.12
LSM4P40070 YBL068W-AYBL068W-A 237 nt1.8□□□□□ -2.12
LSM4P40070 YAP7YOL028C 738 nt1.8□□□□□ -2.12
LSM4P40070 YPL142CYPL142C 318 nt1.8□□□□□ -2.12
LSM4P40070 YBR090CYBR090C 369 nt1.8□□□□□ -2.12
LSM4P40070 ESA1YOR244W 1338 nt1.8□□□□□ -2.12
LSM4P40070 MSL5YLR116W 1431 nt1.8□□□□□ -2.12
LSM4P40070 BRE5YNR051C 1548 nt1.8□□□□□ -2.12
LSM4P40070 CLN3YAL040C 1743 nt1.8□□□□□ -2.12
LSM4P40070 YBP2YGL060W 1926 nt1.79□□□□□ -2.12
LSM4P40070 COG3YER157W 2406 nt1.79□□□□□ -2.12
LSM4P40070 snR83snR83 306 nt1.79□□□□□ -2.12
LSM4P40070 RPS17BYDR447C 411 nt1.79□□□□□ -2.12
LSM4P40070 SDC1YDR469W 528 nt1.79□□□□□ -2.12
LSM4P40070 GTR2YGR163W 1026 nt1.79□□□□□ -2.12
LSM4P40070 YJL052C-AYJL052C-A 120 nt1.79□□□□□ -2.12
LSM4P40070 YJL114WYJL114W 681 nt1.79□□□□□ -2.12
LSM4P40070 GPX1YKL026C 504 nt1.79□□□□□ -2.12
LSM4P40070 SMD2YLR275W 333 nt1.79□□□□□ -2.12
LSM4P40070 YDR170W-AYDR170W-A 1323 nt1.79□□□□□ -2.12
LSM4P40070 YNL284C-AYNL284C-A 1323 nt1.79□□□□□ -2.12
LSM4P40070 NOP12YOL041C 1380 nt1.79□□□□□ -2.12
LSM4P40070 YJR098CYJR098C 1971 nt1.79□□□□□ -2.12
LSM4P40070 PSK2YOL045W 3306 nt1.79□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 52.1 ms