Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHKAP35790 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CHKAP35790 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.75■■□□□ 1.07
CHKAP35790 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
CHKAP35790 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CHKAP35790 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.75■■□□□ 1.07
CHKAP35790 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHKAP35790 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHKAP35790 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHKAP35790 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.75■■□□□ 1.07
CHKAP35790 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHKAP35790 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CHKAP35790 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.74■■□□□ 1.07
CHKAP35790 GPX1P1-201ENST00000388829 606 ntBASIC21.74■■□□□ 1.07
CHKAP35790 CNN2P6-201ENST00000439038 900 ntBASIC21.74■■□□□ 1.07
CHKAP35790 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.74■■□□□ 1.07
CHKAP35790 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHKAP35790 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHKAP35790 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CHKAP35790 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.74■■□□□ 1.07
CHKAP35790 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHKAP35790 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHKAP35790 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHKAP35790 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHKAP35790 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHKAP35790 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHKAP35790 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHKAP35790 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHKAP35790 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CHKAP35790 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHKAP35790 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.73■■□□□ 1.07
CHKAP35790 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHKAP35790 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHKAP35790 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CHKAP35790 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHKAP35790 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.73■■□□□ 1.07
CHKAP35790 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.73■■□□□ 1.07
CHKAP35790 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.73■■□□□ 1.07
CHKAP35790 AL109923.1-201ENST00000618799 583 ntBASIC21.73■■□□□ 1.07
CHKAP35790 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CHKAP35790 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHKAP35790 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CHKAP35790 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.73■■□□□ 1.07
CHKAP35790 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHKAP35790 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHKAP35790 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.73■■□□□ 1.07
CHKAP35790 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.72■■□□□ 1.07
CHKAP35790 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHKAP35790 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHKAP35790 AL049796.1-201ENST00000565336 1766 ntBASIC21.72■■□□□ 1.07
CHKAP35790 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHKAP35790 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHKAP35790 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHKAP35790 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CHKAP35790 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.72■■□□□ 1.07
CHKAP35790 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.72■■□□□ 1.07
CHKAP35790 AC104771.1-201ENST00000603335 964 ntBASIC21.72■■□□□ 1.07
CHKAP35790 AL121832.2-201ENST00000610979 668 ntBASIC21.72■■□□□ 1.07
CHKAP35790 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHKAP35790 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.72■■□□□ 1.07
CHKAP35790 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHKAP35790 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHKAP35790 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHKAP35790 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHKAP35790 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHKAP35790 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHKAP35790 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHKAP35790 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHKAP35790 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CHKAP35790 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.71■■□□□ 1.07
CHKAP35790 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.71■■□□□ 1.07
CHKAP35790 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHKAP35790 AC007322.4-201ENST00000509611 723 ntBASIC21.71■■□□□ 1.07
CHKAP35790 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHKAP35790 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.71■■□□□ 1.07
CHKAP35790 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CHKAP35790 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHKAP35790 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHKAP35790 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHKAP35790 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHKAP35790 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.71■■□□□ 1.07
CHKAP35790 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHKAP35790 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHKAP35790 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHKAP35790 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHKAP35790 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHKAP35790 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHKAP35790 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHKAP35790 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CHKAP35790 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHKAP35790 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHKAP35790 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.7■■□□□ 1.06
CHKAP35790 AL050303.2-201ENST00000619798 666 ntBASIC21.7■■□□□ 1.06
CHKAP35790 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.7■■□□□ 1.06
CHKAP35790 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHKAP35790 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHKAP35790 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CHKAP35790 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHKAP35790 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHKAP35790 AC061975.6-201ENST00000579045 1553 ntBASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms