Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.73■■□□□ 1.07
CTNNA1P35221 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.73■■□□□ 1.07
CTNNA1P35221 AP004607.4-201ENST00000530158 1459 ntBASIC21.73■■□□□ 1.07
CTNNA1P35221 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CTNNA1P35221 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTNNA1P35221 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.73■■□□□ 1.07
CTNNA1P35221 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTNNA1P35221 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.73■■□□□ 1.07
CTNNA1P35221 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTNNA1P35221 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTNNA1P35221 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTNNA1P35221 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTNNA1P35221 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTNNA1P35221 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTNNA1P35221 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CTNNA1P35221 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CTNNA1P35221 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.73■■□□□ 1.07
CTNNA1P35221 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CTNNA1P35221 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CTNNA1P35221 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTNNA1P35221 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTNNA1P35221 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CTNNA1P35221 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTNNA1P35221 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CTNNA1P35221 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTNNA1P35221 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.72■■□□□ 1.07
CTNNA1P35221 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTNNA1P35221 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.72■■□□□ 1.07
CTNNA1P35221 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.72■■□□□ 1.07
CTNNA1P35221 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTNNA1P35221 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CTNNA1P35221 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTNNA1P35221 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTNNA1P35221 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTNNA1P35221 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTNNA1P35221 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CTNNA1P35221 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTNNA1P35221 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTNNA1P35221 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CTNNA1P35221 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTNNA1P35221 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.71■■□□□ 1.07
CTNNA1P35221 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.71■■□□□ 1.07
CTNNA1P35221 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.71■■□□□ 1.07
CTNNA1P35221 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTNNA1P35221 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTNNA1P35221 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTNNA1P35221 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CTNNA1P35221 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTNNA1P35221 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.7■■□□□ 1.07
CTNNA1P35221 AC011484.1-201ENST00000377652 1995 ntBASIC21.7■■□□□ 1.07
CTNNA1P35221 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
CTNNA1P35221 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTNNA1P35221 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CTNNA1P35221 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.7■■□□□ 1.06
CTNNA1P35221 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CTNNA1P35221 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.7■■□□□ 1.06
CTNNA1P35221 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTNNA1P35221 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.7■■□□□ 1.06
CTNNA1P35221 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTNNA1P35221 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTNNA1P35221 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.7■■□□□ 1.06
CTNNA1P35221 AC020907.5-201ENST00000624372 1936 ntBASIC21.7■■□□□ 1.06
CTNNA1P35221 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.7■■□□□ 1.06
CTNNA1P35221 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CTNNA1P35221 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTNNA1P35221 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTNNA1P35221 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTNNA1P35221 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.69■■□□□ 1.06
CTNNA1P35221 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CTNNA1P35221 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.69■■□□□ 1.06
CTNNA1P35221 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTNNA1P35221 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.69■■□□□ 1.06
CTNNA1P35221 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTNNA1P35221 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTNNA1P35221 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CTNNA1P35221 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CTNNA1P35221 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTNNA1P35221 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTNNA1P35221 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CTNNA1P35221 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.68■■□□□ 1.06
CTNNA1P35221 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTNNA1P35221 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.68■■□□□ 1.06
CTNNA1P35221 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CTNNA1P35221 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CTNNA1P35221 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.68■■□□□ 1.06
CTNNA1P35221 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.68■■□□□ 1.06
CTNNA1P35221 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.68■■□□□ 1.06
CTNNA1P35221 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTNNA1P35221 AL358852.1-201ENST00000623174 1268 ntBASIC21.68■■□□□ 1.06
CTNNA1P35221 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTNNA1P35221 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.68■■□□□ 1.06
CTNNA1P35221 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.68■■□□□ 1.06
CTNNA1P35221 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CTNNA1P35221 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.68■■□□□ 1.06
CTNNA1P35221 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.68■■□□□ 1.06
CTNNA1P35221 AL391422.3-201ENST00000603791 2761 ntBASIC21.68■■□□□ 1.06
CTNNA1P35221 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTNNA1P35221 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CTNNA1P35221 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTNNA1P35221 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms