Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD40P25942 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD40P25942 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD40P25942 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.82■□□□□ 0.44
CD40P25942 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.82■□□□□ 0.44
CD40P25942 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD40P25942 KRT18P68-201ENST00000392293 1000 ntBASIC17.82■□□□□ 0.44
CD40P25942 RNA5SP413-201ENST00000516373 109 ntBASIC17.82■□□□□ 0.44
CD40P25942 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD40P25942 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CD40P25942 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.82■□□□□ 0.44
CD40P25942 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD40P25942 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.82■□□□□ 0.44
CD40P25942 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD40P25942 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.82■□□□□ 0.44
CD40P25942 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CD40P25942 Z98882.1-201ENST00000622160 2253 ntBASIC17.82■□□□□ 0.44
CD40P25942 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CD40P25942 CYP21A1P-202ENST00000354927 1481 ntBASIC17.82■□□□□ 0.44
CD40P25942 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.82■□□□□ 0.44
CD40P25942 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD40P25942 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD40P25942 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD40P25942 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.81■□□□□ 0.44
CD40P25942 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.81■□□□□ 0.44
CD40P25942 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.81■□□□□ 0.44
CD40P25942 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.81■□□□□ 0.44
CD40P25942 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD40P25942 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD40P25942 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CD40P25942 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.81■□□□□ 0.44
CD40P25942 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.81■□□□□ 0.44
CD40P25942 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD40P25942 TSPY20P-201ENST00000450910 630 ntBASIC17.81■□□□□ 0.44
CD40P25942 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.81■□□□□ 0.44
CD40P25942 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.81■□□□□ 0.44
CD40P25942 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.81■□□□□ 0.44
CD40P25942 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.81■□□□□ 0.44
CD40P25942 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CD40P25942 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD40P25942 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CD40P25942 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CD40P25942 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD40P25942 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.8■□□□□ 0.44
CD40P25942 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD40P25942 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD40P25942 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CD40P25942 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.8■□□□□ 0.44
CD40P25942 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD40P25942 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.8■□□□□ 0.44
CD40P25942 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CD40P25942 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CD40P25942 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CD40P25942 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.8■□□□□ 0.44
CD40P25942 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CD40P25942 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CD40P25942 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.8■□□□□ 0.44
CD40P25942 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.8■□□□□ 0.44
CD40P25942 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CD40P25942 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
CD40P25942 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD40P25942 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD40P25942 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD40P25942 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD40P25942 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.79■□□□□ 0.44
CD40P25942 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.79■□□□□ 0.44
CD40P25942 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
CD40P25942 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD40P25942 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.79■□□□□ 0.44
CD40P25942 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.79■□□□□ 0.44
CD40P25942 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.79■□□□□ 0.44
CD40P25942 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.79■□□□□ 0.44
CD40P25942 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.79■□□□□ 0.44
CD40P25942 MIR4651-201ENST00000582622 73 ntBASIC17.79■□□□□ 0.44
CD40P25942 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CD40P25942 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD40P25942 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CD40P25942 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CD40P25942 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD40P25942 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.79■□□□□ 0.44
CD40P25942 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD40P25942 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD40P25942 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.78■□□□□ 0.44
CD40P25942 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.78■□□□□ 0.44
CD40P25942 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD40P25942 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.78■□□□□ 0.44
CD40P25942 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD40P25942 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.78■□□□□ 0.44
CD40P25942 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD40P25942 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.78■□□□□ 0.44
CD40P25942 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD40P25942 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD40P25942 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD40P25942 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD40P25942 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD40P25942 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.78■□□□□ 0.44
CD40P25942 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD40P25942 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.78■□□□□ 0.44
CD40P25942 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD40P25942 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms