Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL8A2P25067 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.43■□□□□ 0.38
COL8A2P25067 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL8A2P25067 ABHD17AP1-201ENST00000358206 933 ntBASIC17.43■□□□□ 0.38
COL8A2P25067 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.43■□□□□ 0.38
COL8A2P25067 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL8A2P25067 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.43■□□□□ 0.38
COL8A2P25067 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.43■□□□□ 0.38
COL8A2P25067 AC007322.3-201ENST00000426526 701 ntBASIC17.43■□□□□ 0.38
COL8A2P25067 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.43■□□□□ 0.38
COL8A2P25067 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.43■□□□□ 0.38
COL8A2P25067 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.43■□□□□ 0.38
COL8A2P25067 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.43■□□□□ 0.38
COL8A2P25067 AC097658.1-201ENST00000475555 843 ntBASIC17.43■□□□□ 0.38
COL8A2P25067 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.43■□□□□ 0.38
COL8A2P25067 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL8A2P25067 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL8A2P25067 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL8A2P25067 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL8A2P25067 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL8A2P25067 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL8A2P25067 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL8A2P25067 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL8A2P25067 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL8A2P25067 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.42■□□□□ 0.38
COL8A2P25067 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL8A2P25067 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL8A2P25067 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.42■□□□□ 0.38
COL8A2P25067 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL8A2P25067 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL8A2P25067 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL8A2P25067 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.42■□□□□ 0.38
COL8A2P25067 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.42■□□□□ 0.38
COL8A2P25067 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
COL8A2P25067 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL8A2P25067 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL8A2P25067 LSM12P1-201ENST00000411836 588 ntBASIC17.42■□□□□ 0.38
COL8A2P25067 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
COL8A2P25067 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.42■□□□□ 0.38
COL8A2P25067 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.42■□□□□ 0.38
COL8A2P25067 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.42■□□□□ 0.38
COL8A2P25067 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.42■□□□□ 0.38
COL8A2P25067 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.42■□□□□ 0.38
COL8A2P25067 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL8A2P25067 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.42■□□□□ 0.38
COL8A2P25067 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
COL8A2P25067 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL8A2P25067 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL8A2P25067 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.42■□□□□ 0.38
COL8A2P25067 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.42■□□□□ 0.38
COL8A2P25067 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL8A2P25067 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
COL8A2P25067 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL8A2P25067 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL8A2P25067 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL8A2P25067 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.41■□□□□ 0.38
COL8A2P25067 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
COL8A2P25067 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL8A2P25067 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL8A2P25067 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.41■□□□□ 0.38
COL8A2P25067 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL8A2P25067 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL8A2P25067 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.41■□□□□ 0.38
COL8A2P25067 DUSP5P2-201ENST00000426873 1033 ntBASIC17.41■□□□□ 0.38
COL8A2P25067 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
COL8A2P25067 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.41■□□□□ 0.38
COL8A2P25067 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.41■□□□□ 0.38
COL8A2P25067 AC091874.3-201ENST00000512672 1195 ntBASIC17.41■□□□□ 0.38
COL8A2P25067 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.41■□□□□ 0.38
COL8A2P25067 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.41■□□□□ 0.38
COL8A2P25067 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.41■□□□□ 0.38
COL8A2P25067 MIR4651-201ENST00000582622 73 ntBASIC17.41■□□□□ 0.38
COL8A2P25067 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.41■□□□□ 0.38
COL8A2P25067 AC100791.3-201ENST00000617619 330 ntBASIC17.41■□□□□ 0.38
COL8A2P25067 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.41■□□□□ 0.38
COL8A2P25067 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
COL8A2P25067 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
COL8A2P25067 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL8A2P25067 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL8A2P25067 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
COL8A2P25067 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.41■□□□□ 0.38
COL8A2P25067 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL8A2P25067 KRT17P1-201ENST00000399211 1546 ntBASIC17.41■□□□□ 0.38
COL8A2P25067 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.41■□□□□ 0.38
COL8A2P25067 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.41■□□□□ 0.38
COL8A2P25067 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
COL8A2P25067 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
COL8A2P25067 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL8A2P25067 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.4■□□□□ 0.38
COL8A2P25067 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.4■□□□□ 0.38
COL8A2P25067 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL8A2P25067 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.4■□□□□ 0.38
COL8A2P25067 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL8A2P25067 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.4■□□□□ 0.38
COL8A2P25067 RNA5SP413-201ENST00000516373 109 ntBASIC17.4■□□□□ 0.38
COL8A2P25067 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.4■□□□□ 0.38
COL8A2P25067 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.4■□□□□ 0.38
COL8A2P25067 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
COL8A2P25067 CYP2T3P-201ENST00000601990 817 ntBASIC17.4■□□□□ 0.38
COL8A2P25067 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms