Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
MMP8P22894 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
MMP8P22894 AP005212.1-201ENST00000581547 1997 ntBASIC21.74■■□□□ 1.07
MMP8P22894 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.74■■□□□ 1.07
MMP8P22894 AC073314.1-201ENST00000568729 2216 ntBASIC21.74■■□□□ 1.07
MMP8P22894 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP8P22894 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP8P22894 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.73■■□□□ 1.07
MMP8P22894 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.73■■□□□ 1.07
MMP8P22894 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.73■■□□□ 1.07
MMP8P22894 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MMP8P22894 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MMP8P22894 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.73■■□□□ 1.07
MMP8P22894 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP8P22894 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP8P22894 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
MMP8P22894 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP8P22894 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP8P22894 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP8P22894 LINC01006-201ENST00000333319 2292 ntBASIC21.72■■□□□ 1.07
MMP8P22894 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MMP8P22894 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MMP8P22894 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP8P22894 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP8P22894 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP8P22894 AC006015.1-201ENST00000429970 570 ntBASIC21.72■■□□□ 1.07
MMP8P22894 TERF1P5-201ENST00000477545 1207 ntBASIC21.72■■□□□ 1.07
MMP8P22894 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MMP8P22894 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
MMP8P22894 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.72■■□□□ 1.07
MMP8P22894 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP8P22894 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
MMP8P22894 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP8P22894 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.72■■□□□ 1.07
MMP8P22894 LINC01521-201ENST00000504184 1943 ntBASIC21.72■■□□□ 1.07
MMP8P22894 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP8P22894 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP8P22894 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.72■■□□□ 1.07
MMP8P22894 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP8P22894 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP8P22894 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP8P22894 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP8P22894 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
MMP8P22894 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
MMP8P22894 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.71■■□□□ 1.07
MMP8P22894 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MMP8P22894 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP8P22894 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.71■■□□□ 1.07
MMP8P22894 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.71■■□□□ 1.07
MMP8P22894 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.71■■□□□ 1.07
MMP8P22894 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP8P22894 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP8P22894 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP8P22894 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP8P22894 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP8P22894 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MMP8P22894 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP8P22894 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.7■■□□□ 1.07
MMP8P22894 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
MMP8P22894 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
MMP8P22894 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
MMP8P22894 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
MMP8P22894 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP8P22894 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MMP8P22894 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MMP8P22894 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
MMP8P22894 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.7■■□□□ 1.06
MMP8P22894 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.7■■□□□ 1.06
MMP8P22894 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.7■■□□□ 1.06
MMP8P22894 AC007322.3-201ENST00000426526 701 ntBASIC21.7■■□□□ 1.06
MMP8P22894 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MMP8P22894 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MMP8P22894 MFSD11-216ENST00000590393 1141 ntBASIC21.7■■□□□ 1.06
MMP8P22894 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP8P22894 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MMP8P22894 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
MMP8P22894 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP8P22894 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MMP8P22894 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP8P22894 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP8P22894 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.69■■□□□ 1.06
MMP8P22894 GABARAPL3-202ENST00000624044 1851 ntBASIC21.69■■□□□ 1.06
MMP8P22894 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP8P22894 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP8P22894 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP8P22894 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP8P22894 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.69■■□□□ 1.06
MMP8P22894 AL121603.2-201ENST00000557373 2117 ntBASIC21.69■■□□□ 1.06
MMP8P22894 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
MMP8P22894 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
MMP8P22894 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.69■■□□□ 1.06
MMP8P22894 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
MMP8P22894 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP8P22894 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.69■■□□□ 1.06
MMP8P22894 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
MMP8P22894 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
MMP8P22894 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP8P22894 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MMP8P22894 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.69■■□□□ 1.06
MMP8P22894 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms