Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ERCC3P19447 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.88■■□□□ 1.41
ERCC3P19447 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
ERCC3P19447 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
ERCC3P19447 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.88■■□□□ 1.41
ERCC3P19447 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ERCC3P19447 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.88■■□□□ 1.41
ERCC3P19447 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
ERCC3P19447 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
ERCC3P19447 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ERCC3P19447 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.88■■□□□ 1.41
ERCC3P19447 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.88■■□□□ 1.41
ERCC3P19447 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
ERCC3P19447 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.87■■□□□ 1.41
ERCC3P19447 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ERCC3P19447 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.87■■□□□ 1.41
ERCC3P19447 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ERCC3P19447 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ERCC3P19447 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.87■■□□□ 1.41
ERCC3P19447 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.87■■□□□ 1.41
ERCC3P19447 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
ERCC3P19447 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
ERCC3P19447 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ERCC3P19447 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ERCC3P19447 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ERCC3P19447 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
ERCC3P19447 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.86■■□□□ 1.41
ERCC3P19447 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.86■■□□□ 1.41
ERCC3P19447 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ERCC3P19447 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ERCC3P19447 MCRIP2P1-201ENST00000394346 511 ntBASIC23.86■■□□□ 1.41
ERCC3P19447 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.86■■□□□ 1.41
ERCC3P19447 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ERCC3P19447 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ERCC3P19447 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ERCC3P19447 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ERCC3P19447 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
ERCC3P19447 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ERCC3P19447 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ERCC3P19447 FAM99A-202ENST00000538190 1989 ntBASIC23.85■■□□□ 1.41
ERCC3P19447 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
ERCC3P19447 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.85■■□□□ 1.41
ERCC3P19447 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ERCC3P19447 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.85■■□□□ 1.41
ERCC3P19447 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ERCC3P19447 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.85■■□□□ 1.41
ERCC3P19447 AC060766.5-201ENST00000590539 871 ntBASIC23.85■■□□□ 1.41
ERCC3P19447 AC008403.3-201ENST00000598924 454 ntBASIC23.85■■□□□ 1.41
ERCC3P19447 AL589743.5-201ENST00000616611 1050 ntBASIC23.85■■□□□ 1.41
ERCC3P19447 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.85■■□□□ 1.41
ERCC3P19447 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
ERCC3P19447 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ERCC3P19447 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ERCC3P19447 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.84■■□□□ 1.41
ERCC3P19447 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.84■■□□□ 1.41
ERCC3P19447 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ERCC3P19447 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.84■■□□□ 1.41
ERCC3P19447 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ERCC3P19447 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.84■■□□□ 1.41
ERCC3P19447 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
ERCC3P19447 HLA-B-256ENST00000639848 1089 ntBASIC23.84■■□□□ 1.41
ERCC3P19447 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ERCC3P19447 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.84■■□□□ 1.41
ERCC3P19447 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ERCC3P19447 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
ERCC3P19447 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ERCC3P19447 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ERCC3P19447 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.83■■□□□ 1.41
ERCC3P19447 FBXW4P1-201ENST00000426721 2239 ntBASIC23.83■■□□□ 1.41
ERCC3P19447 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ERCC3P19447 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.83■■□□□ 1.41
ERCC3P19447 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ERCC3P19447 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ERCC3P19447 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ERCC3P19447 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ERCC3P19447 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.83■■□□□ 1.41
ERCC3P19447 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ERCC3P19447 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ERCC3P19447 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
ERCC3P19447 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.83■■□□□ 1.4
ERCC3P19447 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
ERCC3P19447 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.82■■□□□ 1.4
ERCC3P19447 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ERCC3P19447 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
ERCC3P19447 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.82■■□□□ 1.4
ERCC3P19447 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
ERCC3P19447 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ERCC3P19447 KRT18P68-201ENST00000392293 1000 ntBASIC23.82■■□□□ 1.4
ERCC3P19447 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.82■■□□□ 1.4
ERCC3P19447 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
ERCC3P19447 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
ERCC3P19447 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.82■■□□□ 1.4
ERCC3P19447 AL596275.1-201ENST00000423464 877 ntBASIC23.82■■□□□ 1.4
ERCC3P19447 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ERCC3P19447 RPS2P4-201ENST00000476944 856 ntBASIC23.82■■□□□ 1.4
ERCC3P19447 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.82■■□□□ 1.4
ERCC3P19447 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.82■■□□□ 1.4
ERCC3P19447 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
ERCC3P19447 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.82■■□□□ 1.4
ERCC3P19447 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms