Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
ERCC2P18074 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ERCC2P18074 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC2P18074 CNN2P6-201ENST00000439038 900 ntBASIC21.23■□□□□ 0.99
ERCC2P18074 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
ERCC2P18074 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ERCC2P18074 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.23■□□□□ 0.99
ERCC2P18074 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC2P18074 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC2P18074 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC2P18074 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
ERCC2P18074 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC2P18074 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC2P18074 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.23■□□□□ 0.99
ERCC2P18074 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC2P18074 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC2P18074 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ERCC2P18074 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC2P18074 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.22■□□□□ 0.99
ERCC2P18074 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC2P18074 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC2P18074 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC2P18074 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC2P18074 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC2P18074 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC2P18074 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC2P18074 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC2P18074 AC004911.1-201ENST00000416316 871 ntBASIC21.22■□□□□ 0.99
ERCC2P18074 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.22■□□□□ 0.99
ERCC2P18074 AC007322.3-201ENST00000426526 701 ntBASIC21.22■□□□□ 0.99
ERCC2P18074 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC2P18074 AC007322.4-201ENST00000509611 723 ntBASIC21.22■□□□□ 0.99
ERCC2P18074 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.22■□□□□ 0.99
ERCC2P18074 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.22■□□□□ 0.99
ERCC2P18074 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.22■□□□□ 0.99
ERCC2P18074 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC2P18074 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC2P18074 AL137784.2-201ENST00000607332 1000 ntBASIC21.22■□□□□ 0.99
ERCC2P18074 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.22■□□□□ 0.99
ERCC2P18074 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ERCC2P18074 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC2P18074 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.22■□□□□ 0.99
ERCC2P18074 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC2P18074 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC2P18074 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.22■□□□□ 0.99
ERCC2P18074 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.22■□□□□ 0.99
ERCC2P18074 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC2P18074 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ERCC2P18074 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC2P18074 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.21■□□□□ 0.99
ERCC2P18074 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.21■□□□□ 0.99
ERCC2P18074 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC2P18074 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC2P18074 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.21■□□□□ 0.99
ERCC2P18074 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.21■□□□□ 0.99
ERCC2P18074 CDV3P1-201ENST00000471403 739 ntBASIC21.21■□□□□ 0.99
ERCC2P18074 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.21■□□□□ 0.99
ERCC2P18074 AL591742.1-201ENST00000604433 565 ntBASIC21.21■□□□□ 0.99
ERCC2P18074 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ERCC2P18074 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC2P18074 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.21■□□□□ 0.99
ERCC2P18074 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC2P18074 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.21■□□□□ 0.99
ERCC2P18074 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC2P18074 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
ERCC2P18074 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC2P18074 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
ERCC2P18074 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.2■□□□□ 0.98
ERCC2P18074 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC2P18074 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.2■□□□□ 0.98
ERCC2P18074 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC2P18074 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.2■□□□□ 0.98
ERCC2P18074 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC2P18074 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC2P18074 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC2P18074 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
ERCC2P18074 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC2P18074 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC2P18074 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC2P18074 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC2P18074 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC2P18074 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC2P18074 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.2■□□□□ 0.98
ERCC2P18074 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
ERCC2P18074 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ERCC2P18074 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ERCC2P18074 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC2P18074 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC2P18074 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC2P18074 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC2P18074 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC2P18074 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC2P18074 AC027702.1-201ENST00000563810 1770 ntBASIC21.19■□□□□ 0.98
ERCC2P18074 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ERCC2P18074 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC2P18074 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
ERCC2P18074 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.19■□□□□ 0.98
ERCC2P18074 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.19■□□□□ 0.98
ERCC2P18074 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ERCC2P18074 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms