Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.09■□□□□ 0.97
SRFP11831 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.09■□□□□ 0.97
SRFP11831 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.09■□□□□ 0.97
SRFP11831 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SRFP11831 AC087633.2-202ENST00000565166 1439 ntBASIC21.09■□□□□ 0.97
SRFP11831 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.09■□□□□ 0.97
SRFP11831 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRFP11831 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.09■□□□□ 0.97
SRFP11831 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SRFP11831 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRFP11831 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRFP11831 AC010542.4-201ENST00000563151 1910 ntBASIC21.08■□□□□ 0.97
SRFP11831 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRFP11831 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.08■□□□□ 0.97
SRFP11831 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRFP11831 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRFP11831 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.08■□□□□ 0.97
SRFP11831 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.08■□□□□ 0.97
SRFP11831 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.08■□□□□ 0.97
SRFP11831 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
SRFP11831 AC006557.6-201ENST00000623071 864 ntBASIC21.08■□□□□ 0.97
SRFP11831 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.08■□□□□ 0.96
SRFP11831 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SRFP11831 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SRFP11831 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
SRFP11831 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.08■□□□□ 0.96
SRFP11831 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
SRFP11831 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SRFP11831 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
SRFP11831 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRFP11831 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SRFP11831 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.07■□□□□ 0.96
SRFP11831 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRFP11831 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.07■□□□□ 0.96
SRFP11831 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRFP11831 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.07■□□□□ 0.96
SRFP11831 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SRFP11831 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SRFP11831 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
SRFP11831 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.07■□□□□ 0.96
SRFP11831 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SRFP11831 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SRFP11831 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SRFP11831 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.07■□□□□ 0.96
SRFP11831 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
SRFP11831 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SRFP11831 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRFP11831 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SRFP11831 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SRFP11831 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
SRFP11831 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRFP11831 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRFP11831 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.06■□□□□ 0.96
SRFP11831 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.06■□□□□ 0.96
SRFP11831 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SRFP11831 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SRFP11831 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.06■□□□□ 0.96
SRFP11831 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRFP11831 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.06■□□□□ 0.96
SRFP11831 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.06■□□□□ 0.96
SRFP11831 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SRFP11831 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRFP11831 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.06■□□□□ 0.96
SRFP11831 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRFP11831 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.05■□□□□ 0.96
SRFP11831 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRFP11831 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.05■□□□□ 0.96
SRFP11831 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRFP11831 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRFP11831 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRFP11831 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.05■□□□□ 0.96
SRFP11831 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SRFP11831 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRFP11831 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.05■□□□□ 0.96
SRFP11831 AL390719.1-204ENST00000412397 1219 ntBASIC21.05■□□□□ 0.96
SRFP11831 PGM5P4-201ENST00000421970 445 ntBASIC21.05■□□□□ 0.96
SRFP11831 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.05■□□□□ 0.96
SRFP11831 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.05■□□□□ 0.96
SRFP11831 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.05■□□□□ 0.96
SRFP11831 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRFP11831 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.05■□□□□ 0.96
SRFP11831 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
SRFP11831 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRFP11831 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRFP11831 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRFP11831 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRFP11831 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRFP11831 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.04■□□□□ 0.96
SRFP11831 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.04■□□□□ 0.96
SRFP11831 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRFP11831 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.04■□□□□ 0.96
SRFP11831 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.04■□□□□ 0.96
SRFP11831 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.04■□□□□ 0.96
SRFP11831 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRFP11831 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.04■□□□□ 0.96
SRFP11831 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.04■□□□□ 0.96
SRFP11831 CD177P1-201ENST00000606252 935 ntBASIC21.04■□□□□ 0.96
SRFP11831 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.04■□□□□ 0.96
SRFP11831 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRFP11831 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms