Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBL4AP11441 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBL4AP11441 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.02■□□□□ 0.64
UBL4AP11441 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.02■□□□□ 0.64
UBL4AP11441 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBL4AP11441 UBE2DNL-204ENST00000602536 740 ntBASIC19.02■□□□□ 0.64
UBL4AP11441 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBL4AP11441 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.02■□□□□ 0.63
UBL4AP11441 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
UBL4AP11441 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBL4AP11441 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBL4AP11441 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBL4AP11441 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBL4AP11441 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBL4AP11441 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.01■□□□□ 0.63
UBL4AP11441 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.01■□□□□ 0.63
UBL4AP11441 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBL4AP11441 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.01■□□□□ 0.63
UBL4AP11441 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBL4AP11441 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.01■□□□□ 0.63
UBL4AP11441 RARRES2P11-201ENST00000635158 484 ntBASIC19.01■□□□□ 0.63
UBL4AP11441 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
UBL4AP11441 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBL4AP11441 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBL4AP11441 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBL4AP11441 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
UBL4AP11441 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
UBL4AP11441 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19■□□□□ 0.63
UBL4AP11441 AC121338.2-201ENST00000622535 1744 ntBASIC19■□□□□ 0.63
UBL4AP11441 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBL4AP11441 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19■□□□□ 0.63
UBL4AP11441 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBL4AP11441 GXYLT1P2-201ENST00000433312 1230 ntBASIC19■□□□□ 0.63
UBL4AP11441 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19■□□□□ 0.63
UBL4AP11441 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBL4AP11441 DBI-210ENST00000542275 757 ntTSL 5 BASIC19■□□□□ 0.63
UBL4AP11441 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19■□□□□ 0.63
UBL4AP11441 SLC7A5P1-201ENST00000568957 537 ntBASIC19■□□□□ 0.63
UBL4AP11441 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19■□□□□ 0.63
UBL4AP11441 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBL4AP11441 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
UBL4AP11441 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19■□□□□ 0.63
UBL4AP11441 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19■□□□□ 0.63
UBL4AP11441 ANKRD20A6P-201ENST00000618763 204 ntBASIC19■□□□□ 0.63
UBL4AP11441 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19■□□□□ 0.63
UBL4AP11441 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19■□□□□ 0.63
UBL4AP11441 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBL4AP11441 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19■□□□□ 0.63
UBL4AP11441 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
UBL4AP11441 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
UBL4AP11441 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBL4AP11441 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19■□□□□ 0.63
UBL4AP11441 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19■□□□□ 0.63
UBL4AP11441 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBL4AP11441 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
UBL4AP11441 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBL4AP11441 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBL4AP11441 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBL4AP11441 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.99■□□□□ 0.63
UBL4AP11441 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBL4AP11441 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.99■□□□□ 0.63
UBL4AP11441 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.99■□□□□ 0.63
UBL4AP11441 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBL4AP11441 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBL4AP11441 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBL4AP11441 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBL4AP11441 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.99■□□□□ 0.63
UBL4AP11441 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.99■□□□□ 0.63
UBL4AP11441 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.99■□□□□ 0.63
UBL4AP11441 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.99■□□□□ 0.63
UBL4AP11441 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.99■□□□□ 0.63
UBL4AP11441 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBL4AP11441 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBL4AP11441 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBL4AP11441 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBL4AP11441 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
UBL4AP11441 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
UBL4AP11441 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBL4AP11441 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.98■□□□□ 0.63
UBL4AP11441 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBL4AP11441 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
UBL4AP11441 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBL4AP11441 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
UBL4AP11441 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBL4AP11441 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
UBL4AP11441 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBL4AP11441 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBL4AP11441 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBL4AP11441 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.98■□□□□ 0.63
UBL4AP11441 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.98■□□□□ 0.63
UBL4AP11441 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.98■□□□□ 0.63
UBL4AP11441 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.98■□□□□ 0.63
UBL4AP11441 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.98■□□□□ 0.63
UBL4AP11441 AC137761.2-201ENST00000561729 223 ntBASIC18.98■□□□□ 0.63
UBL4AP11441 AC145350.3-201ENST00000569033 163 ntBASIC18.98■□□□□ 0.63
UBL4AP11441 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.98■□□□□ 0.63
UBL4AP11441 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBL4AP11441 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBL4AP11441 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.98■□□□□ 0.63
UBL4AP11441 MYCNOS-205ENST00000641950 531 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms