Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RB1P06400 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RB1P06400 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
RB1P06400 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RB1P06400 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.97■■□□□ 1.11
RB1P06400 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RB1P06400 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.97■■□□□ 1.11
RB1P06400 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RB1P06400 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.97■■□□□ 1.11
RB1P06400 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.97■■□□□ 1.11
RB1P06400 AC133561.5-201ENST00000635547 218 ntBASIC21.97■■□□□ 1.11
RB1P06400 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RB1P06400 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
RB1P06400 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.97■■□□□ 1.11
RB1P06400 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.97■■□□□ 1.11
RB1P06400 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RB1P06400 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RB1P06400 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RB1P06400 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RB1P06400 AC026471.6-201ENST00000622954 1905 ntBASIC21.96■■□□□ 1.11
RB1P06400 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RB1P06400 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.96■■□□□ 1.11
RB1P06400 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RB1P06400 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.96■■□□□ 1.11
RB1P06400 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RB1P06400 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RB1P06400 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.96■■□□□ 1.11
RB1P06400 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RB1P06400 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
RB1P06400 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.96■■□□□ 1.11
RB1P06400 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.96■■□□□ 1.11
RB1P06400 RARRES2P10-201ENST00000564312 460 ntBASIC21.96■■□□□ 1.11
RB1P06400 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.96■■□□□ 1.11
RB1P06400 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.96■■□□□ 1.11
RB1P06400 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
RB1P06400 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RB1P06400 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.96■■□□□ 1.11
RB1P06400 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
RB1P06400 AC010542.4-201ENST00000563151 1910 ntBASIC21.96■■□□□ 1.11
RB1P06400 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RB1P06400 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
RB1P06400 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RB1P06400 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RB1P06400 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RB1P06400 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RB1P06400 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.96■■□□□ 1.11
RB1P06400 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RB1P06400 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.95■■□□□ 1.11
RB1P06400 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RB1P06400 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RB1P06400 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
RB1P06400 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
RB1P06400 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
RB1P06400 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
RB1P06400 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RB1P06400 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RB1P06400 AC087499.1-201ENST00000418141 1075 ntBASIC21.95■■□□□ 1.1
RB1P06400 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.95■■□□□ 1.1
RB1P06400 AC097493.4-201ENST00000641197 219 ntBASIC21.95■■□□□ 1.1
RB1P06400 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
RB1P06400 AC087633.2-202ENST00000565166 1439 ntBASIC21.95■■□□□ 1.1
RB1P06400 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RB1P06400 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RB1P06400 PGM5P4-201ENST00000421970 445 ntBASIC21.94■■□□□ 1.1
RB1P06400 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RB1P06400 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.94■■□□□ 1.1
RB1P06400 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.94■■□□□ 1.1
RB1P06400 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RB1P06400 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RB1P06400 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RB1P06400 AC113410.3-201ENST00000623366 203 ntBASIC21.94■■□□□ 1.1
RB1P06400 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RB1P06400 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RB1P06400 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.94■■□□□ 1.1
RB1P06400 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
RB1P06400 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.94■■□□□ 1.1
RB1P06400 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RB1P06400 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
RB1P06400 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RB1P06400 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RB1P06400 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RB1P06400 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RB1P06400 KRASP1-201ENST00000407852 552 ntBASIC21.93■■□□□ 1.1
RB1P06400 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.93■■□□□ 1.1
RB1P06400 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.93■■□□□ 1.1
RB1P06400 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.93■■□□□ 1.1
RB1P06400 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RB1P06400 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.93■■□□□ 1.1
RB1P06400 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.93■■□□□ 1.1
RB1P06400 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.93■■□□□ 1.1
RB1P06400 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RB1P06400 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RB1P06400 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.93■■□□□ 1.1
RB1P06400 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RB1P06400 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RB1P06400 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.93■■□□□ 1.1
RB1P06400 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RB1P06400 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RB1P06400 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.92■■□□□ 1.1
RB1P06400 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms