Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
IFNA1P01562 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.34■□□□□ 0.21
IFNA1P01562 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFNA1P01562 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFNA1P01562 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
IFNA1P01562 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IFNA1P01562 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
IFNA1P01562 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
IFNA1P01562 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
IFNA1P01562 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IFNA1P01562 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.33■□□□□ 0.2
IFNA1P01562 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
IFNA1P01562 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
IFNA1P01562 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.33■□□□□ 0.2
IFNA1P01562 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IFNA1P01562 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IFNA1P01562 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IFNA1P01562 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IFNA1P01562 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
IFNA1P01562 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
IFNA1P01562 AC121338.2-201ENST00000622535 1744 ntBASIC16.33■□□□□ 0.2
IFNA1P01562 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IFNA1P01562 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
IFNA1P01562 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IFNA1P01562 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IFNA1P01562 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.33■□□□□ 0.2
IFNA1P01562 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.33■□□□□ 0.2
IFNA1P01562 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
IFNA1P01562 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
IFNA1P01562 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
IFNA1P01562 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.32■□□□□ 0.2
IFNA1P01562 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 AC139795.1-202ENST00000500444 432 ntBASIC16.32■□□□□ 0.2
IFNA1P01562 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.32■□□□□ 0.2
IFNA1P01562 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 AC098818.2-201ENST00000564925 2320 ntBASIC16.32■□□□□ 0.2
IFNA1P01562 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.32■□□□□ 0.2
IFNA1P01562 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IFNA1P01562 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 AC112907.3-201ENST00000577781 2400 ntBASIC16.31■□□□□ 0.2
IFNA1P01562 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
IFNA1P01562 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.31■□□□□ 0.2
IFNA1P01562 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 AL034346.1-201ENST00000568244 1277 ntBASIC16.31■□□□□ 0.2
IFNA1P01562 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.31■□□□□ 0.2
IFNA1P01562 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.31■□□□□ 0.2
IFNA1P01562 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
IFNA1P01562 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
IFNA1P01562 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
IFNA1P01562 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
IFNA1P01562 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.31■□□□□ 0.2
IFNA1P01562 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.31■□□□□ 0.2
IFNA1P01562 AL162377.1-201ENST00000618844 1793 ntBASIC16.31■□□□□ 0.2
IFNA1P01562 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IFNA1P01562 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
IFNA1P01562 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.3■□□□□ 0.2
IFNA1P01562 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IFNA1P01562 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.3■□□□□ 0.2
IFNA1P01562 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFNA1P01562 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFNA1P01562 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFNA1P01562 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFNA1P01562 AC116562.4-201ENST00000641316 2276 ntBASIC16.3■□□□□ 0.2
IFNA1P01562 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
IFNA1P01562 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms