Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT33AO76009 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT33AO76009 AP001160.3-201ENST00000601484 763 ntBASIC18.64■□□□□ 0.57
KRT33AO76009 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT33AO76009 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT33AO76009 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
KRT33AO76009 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT33AO76009 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT33AO76009 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT33AO76009 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT33AO76009 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT33AO76009 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.63■□□□□ 0.57
KRT33AO76009 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT33AO76009 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.63■□□□□ 0.57
KRT33AO76009 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT33AO76009 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
KRT33AO76009 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT33AO76009 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
KRT33AO76009 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT33AO76009 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT33AO76009 AC016769.1-201ENST00000409132 1010 ntBASIC18.63■□□□□ 0.57
KRT33AO76009 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.63■□□□□ 0.57
KRT33AO76009 AC137761.2-201ENST00000561729 223 ntBASIC18.63■□□□□ 0.57
KRT33AO76009 AC145350.3-201ENST00000569033 163 ntBASIC18.63■□□□□ 0.57
KRT33AO76009 AC138907.5-202ENST00000569484 235 ntBASIC18.63■□□□□ 0.57
KRT33AO76009 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
KRT33AO76009 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT33AO76009 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.63■□□□□ 0.57
KRT33AO76009 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT33AO76009 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT33AO76009 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT33AO76009 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT33AO76009 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT33AO76009 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT33AO76009 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT33AO76009 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
KRT33AO76009 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.62■□□□□ 0.57
KRT33AO76009 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT33AO76009 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT33AO76009 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT33AO76009 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT33AO76009 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT33AO76009 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT33AO76009 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.62■□□□□ 0.57
KRT33AO76009 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT33AO76009 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT33AO76009 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.62■□□□□ 0.57
KRT33AO76009 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT33AO76009 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
KRT33AO76009 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT33AO76009 FEM1AP4-201ENST00000443167 1987 ntBASIC18.62■□□□□ 0.57
KRT33AO76009 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
KRT33AO76009 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT33AO76009 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT33AO76009 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT33AO76009 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT33AO76009 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT33AO76009 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT33AO76009 AF106564.1-201ENST00000607058 2553 ntBASIC18.61■□□□□ 0.57
KRT33AO76009 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
KRT33AO76009 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
KRT33AO76009 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.61■□□□□ 0.57
KRT33AO76009 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT33AO76009 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.61■□□□□ 0.57
KRT33AO76009 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.61■□□□□ 0.57
KRT33AO76009 POU5F1P4-201ENST00000413175 1085 ntBASIC18.61■□□□□ 0.57
KRT33AO76009 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT33AO76009 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.61■□□□□ 0.57
KRT33AO76009 AC010141.2-201ENST00000452426 721 ntBASIC18.61■□□□□ 0.57
KRT33AO76009 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.61■□□□□ 0.57
KRT33AO76009 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT33AO76009 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT33AO76009 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT33AO76009 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.61■□□□□ 0.57
KRT33AO76009 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT33AO76009 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT33AO76009 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
KRT33AO76009 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT33AO76009 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT33AO76009 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT33AO76009 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT33AO76009 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT33AO76009 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
KRT33AO76009 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT33AO76009 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.6■□□□□ 0.57
KRT33AO76009 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.6■□□□□ 0.57
KRT33AO76009 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.6■□□□□ 0.57
KRT33AO76009 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.6■□□□□ 0.57
KRT33AO76009 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.6■□□□□ 0.57
KRT33AO76009 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT33AO76009 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
KRT33AO76009 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT33AO76009 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT33AO76009 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.6■□□□□ 0.57
KRT33AO76009 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
KRT33AO76009 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT33AO76009 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT33AO76009 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT33AO76009 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
KRT33AO76009 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms