Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPP40O75818 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPP40O75818 UNC93B4-201ENST00000505679 747 ntBASIC21.2■□□□□ 0.98
RPP40O75818 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPP40O75818 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPP40O75818 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.2■□□□□ 0.98
RPP40O75818 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPP40O75818 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPP40O75818 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPP40O75818 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.2■□□□□ 0.98
RPP40O75818 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPP40O75818 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
RPP40O75818 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPP40O75818 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP40O75818 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.19■□□□□ 0.98
RPP40O75818 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RPP40O75818 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP40O75818 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.19■□□□□ 0.98
RPP40O75818 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.19■□□□□ 0.98
RPP40O75818 AL162412.1-201ENST00000567129 965 ntBASIC21.19■□□□□ 0.98
RPP40O75818 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.19■□□□□ 0.98
RPP40O75818 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
RPP40O75818 AL591742.1-201ENST00000604433 565 ntBASIC21.19■□□□□ 0.98
RPP40O75818 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP40O75818 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP40O75818 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPP40O75818 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.19■□□□□ 0.98
RPP40O75818 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.19■□□□□ 0.98
RPP40O75818 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RPP40O75818 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPP40O75818 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPP40O75818 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPP40O75818 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.18■□□□□ 0.98
RPP40O75818 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.18■□□□□ 0.98
RPP40O75818 AC026366.1-201ENST00000488803 879 ntBASIC21.18■□□□□ 0.98
RPP40O75818 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RPP40O75818 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.18■□□□□ 0.98
RPP40O75818 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.18■□□□□ 0.98
RPP40O75818 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.18■□□□□ 0.98
RPP40O75818 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.18■□□□□ 0.98
RPP40O75818 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RPP40O75818 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPP40O75818 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPP40O75818 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPP40O75818 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPP40O75818 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPP40O75818 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.17■□□□□ 0.98
RPP40O75818 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPP40O75818 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPP40O75818 POU5F1P4-201ENST00000413175 1085 ntBASIC21.17■□□□□ 0.98
RPP40O75818 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPP40O75818 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.17■□□□□ 0.98
RPP40O75818 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.17■□□□□ 0.98
RPP40O75818 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.17■□□□□ 0.98
RPP40O75818 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RPP40O75818 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.17■□□□□ 0.98
RPP40O75818 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.17■□□□□ 0.98
RPP40O75818 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RPP40O75818 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RPP40O75818 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPP40O75818 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPP40O75818 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
RPP40O75818 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RPP40O75818 UNC93B5-201ENST00000530315 699 ntBASIC21.16■□□□□ 0.98
RPP40O75818 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.16■□□□□ 0.98
RPP40O75818 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.16■□□□□ 0.98
RPP40O75818 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RPP40O75818 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPP40O75818 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPP40O75818 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.16■□□□□ 0.98
RPP40O75818 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPP40O75818 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPP40O75818 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RPP40O75818 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP40O75818 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP40O75818 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP40O75818 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP40O75818 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP40O75818 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP40O75818 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP40O75818 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
RPP40O75818 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
RPP40O75818 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RPP40O75818 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP40O75818 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.15■□□□□ 0.98
RPP40O75818 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP40O75818 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP40O75818 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP40O75818 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPP40O75818 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RPP40O75818 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPP40O75818 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPP40O75818 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPP40O75818 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPP40O75818 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RPP40O75818 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.15■□□□□ 0.98
RPP40O75818 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.15■□□□□ 0.98
RPP40O75818 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.15■□□□□ 0.98
RPP40O75818 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.15■□□□□ 0.98
RPP40O75818 AP003097.1-201ENST00000530657 1135 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms