Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDHGA12O60330 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHGA12O60330 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDHGA12O60330 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHGA12O60330 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDHGA12O60330 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHGA12O60330 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA12O60330 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PCDHGA12O60330 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA12O60330 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA12O60330 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PCDHGA12O60330 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PCDHGA12O60330 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHGA12O60330 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA12O60330 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHGA12O60330 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHGA12O60330 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHGA12O60330 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PCDHGA12O60330 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA12O60330 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PCDHGA12O60330 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHGA12O60330 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA12O60330 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA12O60330 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA12O60330 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGA12O60330 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA12O60330 KRT17P1-201ENST00000399211 1546 ntBASIC20.43■□□□□ 0.86
PCDHGA12O60330 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA12O60330 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA12O60330 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
PCDHGA12O60330 AC091799.1-201ENST00000422823 811 ntBASIC20.43■□□□□ 0.86
PCDHGA12O60330 UBE2SP1-201ENST00000450587 669 ntBASIC20.43■□□□□ 0.86
PCDHGA12O60330 AC060766.5-201ENST00000590539 871 ntBASIC20.43■□□□□ 0.86
PCDHGA12O60330 CYP2T3P-201ENST00000601990 817 ntBASIC20.43■□□□□ 0.86
PCDHGA12O60330 HLA-B-256ENST00000639848 1089 ntBASIC20.43■□□□□ 0.86
PCDHGA12O60330 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA12O60330 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA12O60330 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGA12O60330 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PCDHGA12O60330 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHGA12O60330 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA12O60330 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA12O60330 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA12O60330 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA12O60330 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA12O60330 C11orf96-202ENST00000528572 1834 ntBASIC20.42■□□□□ 0.86
PCDHGA12O60330 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDHGA12O60330 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA12O60330 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDHGA12O60330 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA12O60330 CDV3P1-201ENST00000471403 739 ntBASIC20.42■□□□□ 0.86
PCDHGA12O60330 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGA12O60330 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHGA12O60330 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHGA12O60330 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA12O60330 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA12O60330 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA12O60330 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA12O60330 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA12O60330 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHGA12O60330 AC003102.1-202ENST00000563394 1796 ntBASIC20.41■□□□□ 0.86
PCDHGA12O60330 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA12O60330 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHGA12O60330 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA12O60330 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA12O60330 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA12O60330 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA12O60330 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PCDHGA12O60330 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA12O60330 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PCDHGA12O60330 AC008550.1-201ENST00000511500 884 ntBASIC20.41■□□□□ 0.86
PCDHGA12O60330 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDHGA12O60330 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHGA12O60330 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA12O60330 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA12O60330 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
PCDHGA12O60330 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA12O60330 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGA12O60330 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA12O60330 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA12O60330 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHGA12O60330 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHGA12O60330 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA12O60330 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA12O60330 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA12O60330 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA12O60330 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PCDHGA12O60330 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGA12O60330 AL355472.2-201ENST00000422958 438 ntBASIC20.4■□□□□ 0.86
PCDHGA12O60330 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA12O60330 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA12O60330 AC245052.3-201ENST00000450182 901 ntBASIC20.4■□□□□ 0.86
PCDHGA12O60330 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.4■□□□□ 0.86
PCDHGA12O60330 AC008403.3-201ENST00000598924 454 ntBASIC20.4■□□□□ 0.86
PCDHGA12O60330 AC092053.2-201ENST00000640557 1818 ntBASIC20.4■□□□□ 0.86
PCDHGA12O60330 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA12O60330 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA12O60330 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA12O60330 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
PCDHGA12O60330 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms