Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
LCMT2O60294 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LCMT2O60294 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.74■□□□□ 0.75
LCMT2O60294 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LCMT2O60294 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LCMT2O60294 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LCMT2O60294 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
LCMT2O60294 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LCMT2O60294 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LCMT2O60294 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LCMT2O60294 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LCMT2O60294 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LCMT2O60294 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LCMT2O60294 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LCMT2O60294 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.74■□□□□ 0.75
LCMT2O60294 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LCMT2O60294 AC007322.3-201ENST00000426526 701 ntBASIC19.74■□□□□ 0.75
LCMT2O60294 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.74■□□□□ 0.75
LCMT2O60294 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.74■□□□□ 0.75
LCMT2O60294 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.74■□□□□ 0.75
LCMT2O60294 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LCMT2O60294 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LCMT2O60294 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LCMT2O60294 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LCMT2O60294 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LCMT2O60294 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LCMT2O60294 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.73■□□□□ 0.75
LCMT2O60294 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LCMT2O60294 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LCMT2O60294 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LCMT2O60294 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.73■□□□□ 0.75
LCMT2O60294 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.73■□□□□ 0.75
LCMT2O60294 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LCMT2O60294 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LCMT2O60294 AC006128.1-201ENST00000624704 1661 ntBASIC19.73■□□□□ 0.75
LCMT2O60294 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LCMT2O60294 CROCCP5-201ENST00000436658 830 ntBASIC19.73■□□□□ 0.75
LCMT2O60294 CDV3P1-201ENST00000471403 739 ntBASIC19.73■□□□□ 0.75
LCMT2O60294 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LCMT2O60294 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.73■□□□□ 0.75
LCMT2O60294 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LCMT2O60294 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.73■□□□□ 0.75
LCMT2O60294 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.73■□□□□ 0.75
LCMT2O60294 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
LCMT2O60294 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LCMT2O60294 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LCMT2O60294 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LCMT2O60294 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.73■□□□□ 0.75
LCMT2O60294 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LCMT2O60294 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LCMT2O60294 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.73■□□□□ 0.75
LCMT2O60294 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LCMT2O60294 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.73■□□□□ 0.75
LCMT2O60294 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LCMT2O60294 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.72■□□□□ 0.75
LCMT2O60294 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LCMT2O60294 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LCMT2O60294 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
LCMT2O60294 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.72■□□□□ 0.75
LCMT2O60294 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.72■□□□□ 0.75
LCMT2O60294 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LCMT2O60294 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LCMT2O60294 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.72■□□□□ 0.75
LCMT2O60294 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.72■□□□□ 0.75
LCMT2O60294 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LCMT2O60294 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LCMT2O60294 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LCMT2O60294 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LCMT2O60294 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.72■□□□□ 0.75
LCMT2O60294 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.72■□□□□ 0.75
LCMT2O60294 AC005181.1-201ENST00000604782 1256 ntBASIC19.72■□□□□ 0.75
LCMT2O60294 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.72■□□□□ 0.75
LCMT2O60294 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.72■□□□□ 0.75
LCMT2O60294 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LCMT2O60294 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LCMT2O60294 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LCMT2O60294 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.71■□□□□ 0.75
LCMT2O60294 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LCMT2O60294 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LCMT2O60294 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.71■□□□□ 0.75
LCMT2O60294 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
LCMT2O60294 AL162412.1-201ENST00000567129 965 ntBASIC19.71■□□□□ 0.75
LCMT2O60294 AL050303.2-201ENST00000619798 666 ntBASIC19.71■□□□□ 0.75
LCMT2O60294 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LCMT2O60294 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
LCMT2O60294 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LCMT2O60294 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LCMT2O60294 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LCMT2O60294 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LCMT2O60294 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LCMT2O60294 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.7■□□□□ 0.74
LCMT2O60294 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCMT2O60294 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCMT2O60294 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCMT2O60294 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
LCMT2O60294 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.7■□□□□ 0.74
LCMT2O60294 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.7■□□□□ 0.74
LCMT2O60294 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCMT2O60294 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.7■□□□□ 0.74
LCMT2O60294 FAM21FP-204ENST00000608637 956 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms