Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF13O43567 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF13O43567 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RNF13O43567 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF13O43567 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RNF13O43567 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF13O43567 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF13O43567 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF13O43567 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF13O43567 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF13O43567 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF13O43567 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF13O43567 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF13O43567 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RNF13O43567 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF13O43567 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF13O43567 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF13O43567 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF13O43567 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF13O43567 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RNF13O43567 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF13O43567 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RNF13O43567 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF13O43567 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF13O43567 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF13O43567 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF13O43567 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF13O43567 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
RNF13O43567 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF13O43567 POU5F1P4-201ENST00000413175 1085 ntBASIC18.71■□□□□ 0.59
RNF13O43567 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF13O43567 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF13O43567 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.71■□□□□ 0.59
RNF13O43567 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF13O43567 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF13O43567 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF13O43567 GABARAPL3-202ENST00000624044 1851 ntBASIC18.71■□□□□ 0.59
RNF13O43567 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF13O43567 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
RNF13O43567 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF13O43567 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF13O43567 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF13O43567 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF13O43567 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF13O43567 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF13O43567 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF13O43567 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF13O43567 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF13O43567 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF13O43567 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF13O43567 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF13O43567 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF13O43567 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF13O43567 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF13O43567 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF13O43567 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF13O43567 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RNF13O43567 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF13O43567 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF13O43567 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF13O43567 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF13O43567 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.69■□□□□ 0.58
RNF13O43567 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF13O43567 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF13O43567 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF13O43567 AC138907.5-202ENST00000569484 235 ntBASIC18.69■□□□□ 0.58
RNF13O43567 TERF1P2-201ENST00000583350 1212 ntBASIC18.69■□□□□ 0.58
RNF13O43567 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF13O43567 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF13O43567 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF13O43567 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF13O43567 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF13O43567 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF13O43567 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF13O43567 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF13O43567 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF13O43567 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF13O43567 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF13O43567 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF13O43567 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF13O43567 CCDC92B-201ENST00000575506 885 ntBASIC18.68■□□□□ 0.58
RNF13O43567 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF13O43567 AC120498.10-201ENST00000621827 505 ntBASIC18.68■□□□□ 0.58
RNF13O43567 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.68■□□□□ 0.58
RNF13O43567 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF13O43567 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF13O43567 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF13O43567 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF13O43567 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF13O43567 AP005212.1-201ENST00000581547 1997 ntBASIC18.68■□□□□ 0.58
RNF13O43567 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF13O43567 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
RNF13O43567 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF13O43567 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF13O43567 AC121338.2-201ENST00000622535 1744 ntBASIC18.67■□□□□ 0.58
RNF13O43567 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF13O43567 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF13O43567 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF13O43567 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF13O43567 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms