Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.52■□□□□ 0.72
CLOCKO15516 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.52■□□□□ 0.72
CLOCKO15516 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.52■□□□□ 0.72
CLOCKO15516 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLOCKO15516 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CLOCKO15516 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CLOCKO15516 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLOCKO15516 AC008764.7-201ENST00000593779 1081 ntBASIC19.52■□□□□ 0.72
CLOCKO15516 AL138724.1-201ENST00000606771 1088 ntBASIC19.52■□□□□ 0.72
CLOCKO15516 AC011298.3-201ENST00000615796 283 ntBASIC19.52■□□□□ 0.72
CLOCKO15516 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLOCKO15516 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLOCKO15516 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.52■□□□□ 0.72
CLOCKO15516 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.52■□□□□ 0.72
CLOCKO15516 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.52■□□□□ 0.72
CLOCKO15516 AC020907.5-201ENST00000624372 1936 ntBASIC19.52■□□□□ 0.72
CLOCKO15516 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLOCKO15516 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLOCKO15516 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
CLOCKO15516 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLOCKO15516 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLOCKO15516 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.52■□□□□ 0.71
CLOCKO15516 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.52■□□□□ 0.71
CLOCKO15516 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLOCKO15516 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLOCKO15516 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLOCKO15516 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLOCKO15516 AC091305.1-201ENST00000479476 895 ntBASIC19.51■□□□□ 0.71
CLOCKO15516 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.51■□□□□ 0.71
CLOCKO15516 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.51■□□□□ 0.71
CLOCKO15516 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.51■□□□□ 0.71
CLOCKO15516 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.51■□□□□ 0.71
CLOCKO15516 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.51■□□□□ 0.71
CLOCKO15516 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CLOCKO15516 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.51■□□□□ 0.71
CLOCKO15516 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.51■□□□□ 0.71
CLOCKO15516 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CLOCKO15516 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.51■□□□□ 0.71
CLOCKO15516 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.51■□□□□ 0.71
CLOCKO15516 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLOCKO15516 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLOCKO15516 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLOCKO15516 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLOCKO15516 AL020996.1-203ENST00000536896 2307 ntBASIC19.5■□□□□ 0.71
CLOCKO15516 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.5■□□□□ 0.71
CLOCKO15516 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLOCKO15516 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLOCKO15516 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLOCKO15516 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLOCKO15516 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.5■□□□□ 0.71
CLOCKO15516 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLOCKO15516 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.5■□□□□ 0.71
CLOCKO15516 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLOCKO15516 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLOCKO15516 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLOCKO15516 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLOCKO15516 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CLOCKO15516 AC121338.2-201ENST00000622535 1744 ntBASIC19.5■□□□□ 0.71
CLOCKO15516 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CLOCKO15516 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLOCKO15516 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLOCKO15516 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLOCKO15516 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.5■□□□□ 0.71
CLOCKO15516 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLOCKO15516 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
CLOCKO15516 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLOCKO15516 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.49■□□□□ 0.71
CLOCKO15516 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLOCKO15516 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLOCKO15516 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLOCKO15516 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLOCKO15516 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CLOCKO15516 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLOCKO15516 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CLOCKO15516 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLOCKO15516 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.49■□□□□ 0.71
CLOCKO15516 OR2I1P-207ENST00000453522 948 ntBASIC19.49■□□□□ 0.71
CLOCKO15516 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.49■□□□□ 0.71
CLOCKO15516 AC027682.1-201ENST00000562846 899 ntBASIC19.49■□□□□ 0.71
CLOCKO15516 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLOCKO15516 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLOCKO15516 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLOCKO15516 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLOCKO15516 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.49■□□□□ 0.71
CLOCKO15516 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLOCKO15516 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CLOCKO15516 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLOCKO15516 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLOCKO15516 AC007225.1-201ENST00000566331 1836 ntBASIC19.48■□□□□ 0.71
CLOCKO15516 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLOCKO15516 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CLOCKO15516 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.48■□□□□ 0.71
CLOCKO15516 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLOCKO15516 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.48■□□□□ 0.71
CLOCKO15516 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CLOCKO15516 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CLOCKO15516 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.48■□□□□ 0.71
CLOCKO15516 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLOCKO15516 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLOCKO15516 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms