Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN4O14493 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN4O14493 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN4O14493 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN4O14493 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN4O14493 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.44■□□□□ 0.7
CLDN4O14493 AC090192.1-201ENST00000517740 490 ntBASIC19.44■□□□□ 0.7
CLDN4O14493 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.44■□□□□ 0.7
CLDN4O14493 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN4O14493 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN4O14493 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN4O14493 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN4O14493 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN4O14493 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN4O14493 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN4O14493 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN4O14493 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN4O14493 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN4O14493 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN4O14493 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.43■□□□□ 0.7
CLDN4O14493 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN4O14493 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN4O14493 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.43■□□□□ 0.7
CLDN4O14493 FAM21FP-204ENST00000608637 956 ntBASIC19.43■□□□□ 0.7
CLDN4O14493 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN4O14493 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN4O14493 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN4O14493 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CLDN4O14493 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CLDN4O14493 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN4O14493 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN4O14493 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN4O14493 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN4O14493 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CLDN4O14493 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CLDN4O14493 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN4O14493 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN4O14493 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN4O14493 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN4O14493 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN4O14493 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN4O14493 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN4O14493 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN4O14493 AC011484.1-201ENST00000377652 1995 ntBASIC19.41■□□□□ 0.7
CLDN4O14493 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN4O14493 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN4O14493 MIR663A-201ENST00000385250 93 ntBASIC19.41■□□□□ 0.7
CLDN4O14493 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CLDN4O14493 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN4O14493 CYP2T1P-201ENST00000432607 1285 ntBASIC19.41■□□□□ 0.7
CLDN4O14493 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN4O14493 CROCCP5-201ENST00000436658 830 ntBASIC19.41■□□□□ 0.7
CLDN4O14493 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN4O14493 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.41■□□□□ 0.7
CLDN4O14493 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN4O14493 OR10C1-204ENST00000622521 1039 ntBASIC19.41■□□□□ 0.7
CLDN4O14493 AF106564.1-201ENST00000607058 2553 ntBASIC19.41■□□□□ 0.7
CLDN4O14493 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN4O14493 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN4O14493 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN4O14493 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CLDN4O14493 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN4O14493 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN4O14493 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN4O14493 AC121338.2-201ENST00000622535 1744 ntBASIC19.4■□□□□ 0.7
CLDN4O14493 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN4O14493 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN4O14493 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN4O14493 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CLDN4O14493 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN4O14493 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN4O14493 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN4O14493 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN4O14493 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN4O14493 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN4O14493 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN4O14493 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CLDN4O14493 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLDN4O14493 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN4O14493 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.39■□□□□ 0.7
CLDN4O14493 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN4O14493 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN4O14493 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CLDN4O14493 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CLDN4O14493 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.39■□□□□ 0.69
CLDN4O14493 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CLDN4O14493 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.39■□□□□ 0.69
CLDN4O14493 RARRES2P4-201ENST00000514074 484 ntBASIC19.39■□□□□ 0.69
CLDN4O14493 AC133552.2-202ENST00000575694 574 ntBASIC19.39■□□□□ 0.69
CLDN4O14493 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.39■□□□□ 0.69
CLDN4O14493 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CLDN4O14493 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.39■□□□□ 0.69
CLDN4O14493 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN4O14493 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN4O14493 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN4O14493 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CLDN4O14493 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN4O14493 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN4O14493 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN4O14493 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms