Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFRSF11BO00300 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.05■□□□□ 0.64
TNFRSF11BO00300 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF11BO00300 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF11BO00300 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF11BO00300 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.05■□□□□ 0.64
TNFRSF11BO00300 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF11BO00300 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF11BO00300 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF11BO00300 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.05■□□□□ 0.64
TNFRSF11BO00300 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.05■□□□□ 0.64
TNFRSF11BO00300 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF11BO00300 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF11BO00300 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF11BO00300 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF11BO00300 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF11BO00300 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 AC126544.1-201ENST00000580842 1059 ntBASIC19.04■□□□□ 0.64
TNFRSF11BO00300 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 AC011484.1-201ENST00000377652 1995 ntBASIC19.04■□□□□ 0.64
TNFRSF11BO00300 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.04■□□□□ 0.64
TNFRSF11BO00300 AC099778.1-201ENST00000568593 1911 ntBASIC19.04■□□□□ 0.64
TNFRSF11BO00300 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
TNFRSF11BO00300 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF11BO00300 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF11BO00300 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF11BO00300 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF11BO00300 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF11BO00300 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF11BO00300 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.03■□□□□ 0.64
TNFRSF11BO00300 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TNFRSF11BO00300 AC233992.3-201ENST00000607491 485 ntBASIC19.03■□□□□ 0.64
TNFRSF11BO00300 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TNFRSF11BO00300 AC005224.4-201ENST00000583262 1652 ntBASIC19.03■□□□□ 0.64
TNFRSF11BO00300 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.03■□□□□ 0.64
TNFRSF11BO00300 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF11BO00300 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF11BO00300 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.03■□□□□ 0.64
TNFRSF11BO00300 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.02■□□□□ 0.64
TNFRSF11BO00300 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFRSF11BO00300 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFRSF11BO00300 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFRSF11BO00300 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFRSF11BO00300 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFRSF11BO00300 AC131281.2-201ENST00000520478 145 ntBASIC19.02■□□□□ 0.64
TNFRSF11BO00300 IGHV3-19-201ENST00000521488 291 ntBASIC19.02■□□□□ 0.64
TNFRSF11BO00300 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.02■□□□□ 0.64
TNFRSF11BO00300 MIR4767-201ENST00000582827 78 ntBASIC19.02■□□□□ 0.64
TNFRSF11BO00300 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFRSF11BO00300 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.02■□□□□ 0.63
TNFRSF11BO00300 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TNFRSF11BO00300 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.02■□□□□ 0.63
TNFRSF11BO00300 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TNFRSF11BO00300 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFRSF11BO00300 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF11BO00300 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF11BO00300 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFRSF11BO00300 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.01■□□□□ 0.63
TNFRSF11BO00300 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.01■□□□□ 0.63
TNFRSF11BO00300 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF11BO00300 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TNFRSF11BO00300 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TNFRSF11BO00300 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TNFRSF11BO00300 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TNFRSF11BO00300 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF11BO00300 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF11BO00300 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19■□□□□ 0.63
TNFRSF11BO00300 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF11BO00300 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms