Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 DUX4L2-201ENST00000561772 1275 ntBASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 AC104187.1-201ENST00000607510 612 ntBASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 DUX4L6-201ENST00000626483 1275 ntBASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 DUX4L1-201ENST00000627662 1275 ntBASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 DUX4L8-201ENST00000629013 1275 ntBASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 DUX4L3-201ENST00000630187 1275 ntBASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 DUX4L7-201ENST00000630678 1275 ntBASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 DUX4L5-201ENST00000630834 1275 ntBASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRGV4A0A0C4DH28 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV4A0A0C4DH28 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV4A0A0C4DH28 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC14.77□□□□□ -0.04
TRGV4A0A0C4DH28 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV4A0A0C4DH28 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.77□□□□□ -0.04
TRGV4A0A0C4DH28 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV4A0A0C4DH28 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV4A0A0C4DH28 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV4A0A0C4DH28 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV4A0A0C4DH28 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TRGV4A0A0C4DH28 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
TRGV4A0A0C4DH28 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV4A0A0C4DH28 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV4A0A0C4DH28 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV4A0A0C4DH28 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRGV4A0A0C4DH28 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TRGV4A0A0C4DH28 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.77□□□□□ -0.05
TRGV4A0A0C4DH28 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.77□□□□□ -0.05
TRGV4A0A0C4DH28 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV4A0A0C4DH28 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.77□□□□□ -0.05
TRGV4A0A0C4DH28 BCL2-203ENST00000589955 5011 ntBASIC14.77□□□□□ -0.05
TRGV4A0A0C4DH28 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV4A0A0C4DH28 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV4A0A0C4DH28 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV4A0A0C4DH28 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV4A0A0C4DH28 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV4A0A0C4DH28 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV4A0A0C4DH28 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.77□□□□□ -0.05
TRGV4A0A0C4DH28 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV4A0A0C4DH28 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 AP001160.3-201ENST00000601484 763 ntBASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV4A0A0C4DH28 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 AC245052.3-201ENST00000450182 901 ntBASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 AC010141.2-201ENST00000452426 721 ntBASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms