Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 AC006015.1-201ENST00000429970 570 ntBASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV2A0A0B4J234 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 AC007322.4-201ENST00000509611 723 ntBASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 AL162412.1-201ENST00000567129 965 ntBASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 AC010536.3-201ENST00000620306 533 ntBASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV2A0A0B4J234 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 AC013268.1-206ENST00000638368 961 ntBASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 AC112229.1-201ENST00000639295 961 ntBASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV2A0A0B4J234 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV2A0A0B4J234 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV2A0A0B4J234 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV2A0A0B4J234 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV2A0A0B4J234 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.53■□□□□ 0.08
TRAV2A0A0B4J234 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV2A0A0B4J234 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV2A0A0B4J234 TERF1P5-201ENST00000477545 1207 ntBASIC15.53■□□□□ 0.08
TRAV2A0A0B4J234 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV2A0A0B4J234 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
TRAV2A0A0B4J234 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms