Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 FP700111.2-201ENST00000619190 1892 ntBASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 AC120024.1-201ENST00000562672 995 ntBASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 AC019171.1-201ENST00000601251 1056 ntBASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 AC016575.1-201ENST00000607026 382 ntBASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV9-1A0A075B6T8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 MIR4281-201ENST00000580852 62 ntBASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV9-1A0A075B6T8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 THA1P-201ENST00000590384 1145 ntBASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV9-1A0A075B6T8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 AC005703.6-201ENST00000623265 1329 ntBASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 SNX5-217ENST00000606557 1087 ntBASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms