Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 GAS5-224ENST00000454068 688 ntTSL 5 BASIC8.78□□□□□ -1
SNX18Q96RF0 AC079953.1-201ENST00000472008 736 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 RPL12P6-201ENST00000495231 498 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 AC091805.1-201ENST00000498395 342 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 AP002026.1-203ENST00000506160 524 ntTSL 4 BASIC8.78□□□□□ -1
SNX18Q96RF0 AC025437.6-201ENST00000518624 935 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 TMEM185AP1-201ENST00000524311 546 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 IL32-216ENST00000529699 672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 AC090099.2-201ENST00000529793 681 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 OR1D4-202ENST00000531680 642 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 IL32-225ENST00000548246 447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 AC092119.1-201ENST00000562640 934 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 AC092115.2-201ENST00000562696 575 ntTSL 3 BASIC8.78□□□□□ -1
SNX18Q96RF0 RN7SL408P-201ENST00000577207 296 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 AC024267.6-202ENST00000579187 1103 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 RN7SL279P-201ENST00000582185 284 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 TDGF1P7-201ENST00000593394 559 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 ZNF814-208ENST00000596604 528 ntTSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 AC005609.3-201ENST00000624566 577 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 CDY3P-201ENST00000454543 1618 ntBASIC8.78□□□□□ -1
SNX18Q96RF0 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 TMPRSS11B-201ENST00000332644 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 NRXN1-212ENST00000412315 2215 ntTSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 PSMA3-AS1-204ENST00000554360 2475 ntTSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 SLC12A1-203ENST00000396577 4708 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
SNX18Q96RF0 ATAD1-201ENST00000308448 4640 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
SNX18Q96RF0 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 TRY2P-202ENST00000616556 2039 ntTSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 OMA1-201ENST00000371226 1935 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 STAU2-215ENST00000521727 3953 ntTSL 5 BASIC8.78□□□□□ -1
SNX18Q96RF0 SOCS4-204ENST00000555846 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SNX18Q96RF0 FBXW7-205ENST00000603548 2562 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1
SNX18Q96RF0 AKAP2-202ENST00000374525 6866 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
SNX18Q96RF0 ZP2-204ENST00000574091 2241 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 EGF-206ENST00000509793 4489 ntTSL 2 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 ZNF280A-201ENST00000302097 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 LIMCH1-215ENST00000512632 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 ZNF185-204ENST00000370268 4305 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 TEX47-201ENST00000297203 1023 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 TAL2-201ENST00000334077 656 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 NDUFB6-201ENST00000350021 666 ntTSL 2 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 MIR210-201ENST00000362168 110 ntBASIC8.77□□□□□ -1.01
SNX18Q96RF0 SLC25A20P1-201ENST00000408043 903 ntBASIC8.77□□□□□ -1.01
SNX18Q96RF0 PA2G4P2-201ENST00000414718 1200 ntBASIC8.77□□□□□ -1.01
SNX18Q96RF0 AL136528.2-201ENST00000416554 351 ntTSL 2 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 MID1IP1-AS1-201ENST00000436893 376 ntTSL 2 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 SEPHS1P6-201ENST00000443084 1179 ntBASIC8.77□□□□□ -1.01
SNX18Q96RF0 AL606469.1-201ENST00000443224 892 ntTSL 2 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 TMBIM1-215ENST00000445635 1251 ntTSL 2 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 AC005280.1-201ENST00000515412 537 ntTSL 5 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 AC090579.1-201ENST00000518591 504 ntTSL 4 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 VN1R46P-201ENST00000519939 850 ntBASIC8.77□□□□□ -1.01
SNX18Q96RF0 AC090568.2-201ENST00000523254 497 ntTSL 4 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 PRSS2-201ENST00000539842 795 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 COA4-204ENST00000541455 1038 ntTSL 5 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 RPEP6-201ENST00000546228 626 ntBASIC8.77□□□□□ -1.01
SNX18Q96RF0 CMC2-207ENST00000564174 424 ntTSL 3 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 BEAN1-AS1-203ENST00000569125 530 ntTSL 4 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 ELOB-205ENST00000572954 331 ntTSL 2 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 AC090282.2-201ENST00000573526 931 ntBASIC8.77□□□□□ -1.01
SNX18Q96RF0 GDPD1-206ENST00000581276 1055 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 TP53TG1-206ENST00000610086 849 ntTSL 3 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 AC009309.1-201ENST00000610262 460 ntBASIC8.77□□□□□ -1.01
SNX18Q96RF0 MIR6776-201ENST00000616678 59 ntBASIC8.77□□□□□ -1.01
SNX18Q96RF0 AC096920.2-201ENST00000624711 339 ntTSL 4 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 TTC38-207ENST00000629918 162 ntTSL 5 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 LINC01002-217ENST00000632405 600 ntTSL 2 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 AC245166.3-201ENST00000636897 257 ntBASIC8.77□□□□□ -1.01
SNX18Q96RF0 AC093390.2-202ENST00000638236 976 ntTSL 5 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 LINC01806-202ENST00000439050 2333 ntTSL 2 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 KIAA1841-203ENST00000402291 4516 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 ANXA10-201ENST00000359299 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 AC005005.3-201ENST00000609017 1410 ntBASIC8.77□□□□□ -1.01
SNX18Q96RF0 INTS4-206ENST00000529807 1845 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 ZNF396-204ENST00000586687 1320 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 TCF20-202ENST00000359486 7410 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 CNEP1R1-206ENST00000565556 1707 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC8.77□□□□□ -1.01
SNX18Q96RF0 SP140-201ENST00000343805 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 TRIM60P19-201ENST00000452879 1462 ntBASIC8.77□□□□□ -1.01
SNX18Q96RF0 ALDH1A2-217ENST00000559517 1468 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 BLOC1S6-201ENST00000220531 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SNX18Q96RF0 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms