Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 NBPF22P-202ENST00000590707 1580 ntTSL 1 (best) BASIC8.78□□□□□ -1
P04436 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
P04436 MYRIP-210ENST00000539167 4635 ntTSL 2 BASIC8.78□□□□□ -1
P04436 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04436 SNHG16-207ENST00000590435 1947 ntTSL 5 BASIC8.78□□□□□ -1
P04436 VSIG4-202ENST00000412866 1474 ntTSL 2 BASIC8.78□□□□□ -1
P04436 NONO-201ENST00000276079 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04436 CYTIP-201ENST00000264192 2260 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04436 CHRNB1-208ENST00000576360 1837 ntTSL 3 BASIC8.78□□□□□ -1
P04436 RCAN1-204ENST00000399272 2164 ntTSL 1 (best) BASIC8.78□□□□□ -1
P04436 RPL32P3-206ENST00000510078 2161 ntTSL 1 (best) BASIC8.78□□□□□ -1
P04436 KNOP1P5-201ENST00000358374 1378 ntBASIC8.78□□□□□ -1
P04436 CBWD1-204ENST00000377447 2513 ntTSL 1 (best) BASIC8.78□□□□□ -1
P04436 SLC17A8-202ENST00000392989 1737 ntTSL 1 (best) BASIC8.78□□□□□ -1
P04436 ADAM28-202ENST00000437154 2085 ntTSL 1 (best) BASIC8.78□□□□□ -1
P04436 MYH8-201ENST00000403437 6041 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
P04436 AL136087.1-201ENST00000305491 426 ntBASIC8.78□□□□□ -1
P04436 ZNF483-202ENST00000355824 1239 ntTSL 1 (best) BASIC8.78□□□□□ -1
P04436 SNORA71A-201ENST00000364729 134 ntBASIC8.78□□□□□ -1
P04436 WFDC3-203ENST00000372630 597 ntTSL 3 BASIC8.78□□□□□ -1
P04436 LIPK-201ENST00000404190 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04436 NPM1P32-201ENST00000412580 604 ntBASIC8.78□□□□□ -1
P04436 LINC01946-201ENST00000416279 418 ntTSL 5 BASIC8.78□□□□□ -1
P04436 PTMAP4-201ENST00000426188 346 ntBASIC8.78□□□□□ -1
P04436 IFNWP18-201ENST00000437472 591 ntBASIC8.78□□□□□ -1
P04436 CASP12-205ENST00000441710 1168 ntTSL 1 (best) BASIC8.78□□□□□ -1
P04436 AC008267.4-201ENST00000442005 521 ntBASIC8.78□□□□□ -1
P04436 IFNWP9-201ENST00000448683 591 ntBASIC8.78□□□□□ -1
P04436 RN7SL666P-201ENST00000460953 304 ntBASIC8.78□□□□□ -1
P04436 DMKN-237ENST00000472252 593 ntAPPRIS ALT2 TSL 3 BASIC8.78□□□□□ -1
P04436 NDUFB4-205ENST00000492739 309 ntTSL 2 BASIC8.78□□□□□ -1
P04436 AC121161.2-201ENST00000502566 659 ntTSL 3 BASIC8.78□□□□□ -1
P04436 AC010261.2-202ENST00000506875 494 ntTSL 5 BASIC8.78□□□□□ -1
P04436 AC091180.2-203ENST00000507337 601 ntTSL 4 BASIC8.78□□□□□ -1
P04436 AC011487.1-201ENST00000509280 887 ntBASIC8.78□□□□□ -1
P04436 TAGLN2P1-201ENST00000524097 587 ntBASIC8.78□□□□□ -1
P04436 AP003064.1-201ENST00000526045 590 ntTSL 4 BASIC8.78□□□□□ -1
P04436 MYL6-206ENST00000547408 683 ntTSL 3 BASIC8.78□□□□□ -1
P04436 TRBV7-1-201ENST00000547918 380 ntAPPRIS P1 BASIC8.78□□□□□ -1
P04436 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC8.78□□□□□ -1
P04436 AC025682.1-204ENST00000580045 733 ntTSL 5 BASIC8.78□□□□□ -1
P04436 AL365214.3-204ENST00000587816 894 ntAPPRIS P5 TSL 5 BASIC8.78□□□□□ -1
P04436 AC005176.1-202ENST00000597791 384 ntBASIC8.78□□□□□ -1
P04436 PROX1-AS1-205ENST00000598091 720 ntTSL 5 BASIC8.78□□□□□ -1
P04436 AC092175.1-201ENST00000605325 200 ntBASIC8.78□□□□□ -1
P04436 AC006058.2-201ENST00000605537 548 ntBASIC8.78□□□□□ -1
P04436 LINC01697-206ENST00000616647 544 ntTSL 5 BASIC8.78□□□□□ -1
P04436 AC244472.5-201ENST00000619103 344 ntAPPRIS P1 BASIC8.78□□□□□ -1
P04436 MIR8078-201ENST00000619811 84 ntBASIC8.78□□□□□ -1
P04436 AP001469.1-202ENST00000626933 695 ntTSL 5 BASIC8.78□□□□□ -1
P04436 C2-AS1-201ENST00000630806 762 ntTSL 2 BASIC8.78□□□□□ -1
P04436 AC097493.5-201ENST00000641103 1010 ntBASIC8.78□□□□□ -1
P04436 PIN4-204ENST00000423432 1605 ntTSL 2 BASIC8.78□□□□□ -1
P04436 CIDEB-203ENST00000554411 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04436 SLC25A19-203ENST00000402418 2331 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04436 C5orf22-201ENST00000325366 3612 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04436 PHC1-214ENST00000544916 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04436 ICAM1-201ENST00000264832 3252 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04436 EHMT1-240ENST00000637318 2983 ntTSL 5 BASIC8.78□□□□□ -1
P04436 AL035696.1-201ENST00000381078 2007 ntTSL 2 BASIC8.78□□□□□ -1
P04436 NAP1L1-203ENST00000431879 2031 ntTSL 2 BASIC8.78□□□□□ -1
P04436 MMS19-202ENST00000355839 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
P04436 IGBP1-202ENST00000356413 1666 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04436 GRB2-204ENST00000392563 2851 ntTSL 1 (best) BASIC8.78□□□□□ -1
P04436 PTGER4P2-CDK2AP2P2-201ENST00000619442 3123 ntTSL 1 (best) BASIC8.78□□□□□ -1
P04436 FRG2LP-201ENST00000586090 1563 ntBASIC8.78□□□□□ -1
P04436 CD22-205ENST00000544992 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
P04436 C3AR1-201ENST00000307637 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
P04436 ZNF41-201ENST00000313116 4297 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
P04436 ICA1-205ENST00000401396 1742 ntTSL 5 BASIC8.77□□□□□ -1
P04436 TMEM237-203ENST00000409883 5415 ntAPPRIS P4 TSL 5 BASIC8.77□□□□□ -1
P04436 ZNF613-202ENST00000391794 2225 ntTSL 2 BASIC8.77□□□□□ -1.01
P04436 IL17RD-202ENST00000320057 4474 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
P04436 SLC25A14-201ENST00000218197 1616 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
P04436 AMMECR1-202ENST00000372057 3380 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
P04436 KIF9-AS1-201ENST00000429315 4898 ntTSL 2 BASIC8.77□□□□□ -1.01
P04436 FAAP24-202ENST00000588258 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
P04436 CTCFL-222ENST00000609232 3668 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
P04436 TYW1-207ENST00000615572 3156 ntTSL 5 BASIC8.77□□□□□ -1.01
P04436 LECT2-201ENST00000274507 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
P04436 OR10H4-201ENST00000322107 951 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
P04436 DEFA3-201ENST00000327857 498 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
P04436 WTAPP1-201ENST00000371455 546 ntTSL 4 BASIC8.77□□□□□ -1.01
P04436 CAV2-203ENST00000393480 1179 ntTSL 2 BASIC8.77□□□□□ -1.01
P04436 H2AFZP1-201ENST00000416034 395 ntBASIC8.77□□□□□ -1.01
P04436 OR4D8P-201ENST00000431137 930 ntBASIC8.77□□□□□ -1.01
P04436 SEPHS1P6-201ENST00000443084 1179 ntBASIC8.77□□□□□ -1.01
P04436 LINC01186-201ENST00000446884 626 ntTSL 2 BASIC8.77□□□□□ -1.01
P04436 LINC01054-201ENST00000446989 514 ntTSL 3 BASIC8.77□□□□□ -1.01
P04436 LINC01627-201ENST00000452923 243 ntTSL 3 BASIC8.77□□□□□ -1.01
P04436 AC020743.1-201ENST00000454877 767 ntTSL 3 BASIC8.77□□□□□ -1.01
P04436 RN7SL151P-201ENST00000460537 283 ntBASIC8.77□□□□□ -1.01
P04436 RN7SL250P-201ENST00000475154 258 ntBASIC8.77□□□□□ -1.01
P04436 COX17-206ENST00000497116 660 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
P04436 RN7SL34P-201ENST00000497296 270 ntBASIC8.77□□□□□ -1.01
P04436 AC105460.1-201ENST00000509399 830 ntTSL 3 BASIC8.77□□□□□ -1.01
P04436 AC009800.1-201ENST00000511357 1006 ntBASIC8.77□□□□□ -1.01
P04436 AC233724.2-201ENST00000515727 271 ntBASIC8.77□□□□□ -1.01
P04436 SNORA68.4-201ENST00000516649 129 ntBASIC8.77□□□□□ -1.01
P04436 HPYR1-201ENST00000520457 982 ntBASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms