Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SYN3-201ENST00000332840 972 ntTSL 5 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 CALCA-202ENST00000361010 916 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 BORCS7-202ENST00000369883 838 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 NCR2-202ENST00000373086 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 NCR2-203ENST00000373089 942 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 VSTM1-203ENST00000376626 922 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 MIR636-201ENST00000384825 99 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 SMARCE1P5-201ENST00000412207 1225 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 LINC02246-201ENST00000412426 991 ntTSL 5 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 AC092474.1-201ENST00000416158 1167 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 AF241728.1-201ENST00000432359 1180 ntTSL 5 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 FBXO36-IT1-201ENST00000432957 582 ntTSL 3 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 RPL12P44-201ENST00000442319 502 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 MRPL21-202ENST00000450904 662 ntTSL 2 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 NPAP1P2-201ENST00000456716 1234 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 PAICSP6-201ENST00000462572 1280 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 RN7SL250P-201ENST00000475154 258 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 PFN1P9-201ENST00000475753 433 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 TRAF3IP3-212ENST00000477431 791 ntTSL 3 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 RN7SL320P-201ENST00000484133 295 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 DPH3P1-201ENST00000486648 249 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 RN7SL384P-201ENST00000490382 298 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 ZBED3-AS1-215ENST00000514905 1156 ntTSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 AC022733.1-201ENST00000521257 739 ntTSL 3 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 AL354919.2-201ENST00000527035 537 ntTSL 4 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 AC136443.3-201ENST00000546674 676 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 AL358334.1-201ENST00000557152 174 ntTSL 5 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 SHBG-218ENST00000576728 776 ntTSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 AC080112.1-201ENST00000583752 487 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 ZNF506-207ENST00000587461 831 ntTSL 3 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 AC036176.2-201ENST00000589763 1153 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 AC006115.3-201ENST00000594400 560 ntTSL 4 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 TEX101-201ENST00000598265 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 CYP2B7P-204ENST00000599831 1272 ntTSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 DPPA5P1-201ENST00000600430 340 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 HCG18-247ENST00000602698 573 ntTSL 3 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 AC005696.3-201ENST00000608984 303 ntTSL 3 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 PSG3-206ENST00000614582 1287 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 AL512638.3-201ENST00000620370 298 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 AC106886.3-201ENST00000621583 547 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 AP003108.5-201ENST00000623008 895 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 SOX2-OT-249ENST00000628810 618 ntTSL 5 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 AC010507.2-201ENST00000632795 676 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 FCRLA-208ENST00000367953 2066 ntTSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 OAS2-203ENST00000449768 2072 ntTSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 SORD2P-202ENST00000561384 2498 ntTSL 5 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 ASTN1-204ENST00000424564 3685 ntTSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 SERINC1-201ENST00000339697 3137 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 TIGIT-206ENST00000486257 3149 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 SELE-202ENST00000367774 1518 ntTSL 5 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 TIMP2-204ENST00000586057 3389 ntTSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 PC-202ENST00000393958 4005 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 SLC35A4-202ENST00000514199 3617 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 FAM86EP-201ENST00000313946 2845 ntTSL 2 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 AC009403.1-202ENST00000460022 1356 ntTSL 2 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 PTPN2-210ENST00000591115 1648 ntTSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 RNF38-206ENST00000377885 4985 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 DLEU1-234ENST00000491615 1451 ntTSL 5 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 PCBP2-207ENST00000546463 1457 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 STEAP3-203ENST00000393110 4262 ntTSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 PKP1-202ENST00000352845 2244 ntTSL 5 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 SH2D1A-202ENST00000371139 2450 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 BBS4-202ENST00000395205 2450 ntTSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 DDX23-201ENST00000308025 3248 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 RNF148-201ENST00000434824 1304 ntAPPRIS P1 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 XKRX-201ENST00000372956 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 SEC16A-204ENST00000313084 3073 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 ARSF-202ENST00000381127 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 BLOC1S6-201ENST00000220531 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 ERCC3-201ENST00000285398 2750 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 AC108058.1-201ENST00000457290 2044 ntTSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 SPINT3-201ENST00000217428 476 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 MND1-201ENST00000240488 968 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 WTAPP1-201ENST00000371455 546 ntTSL 4 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 CRYZL1-206ENST00000413017 627 ntTSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 HCG24-202ENST00000414398 717 ntTSL 3 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 FAM136BP-201ENST00000428729 417 ntBASIC8.82□□□□□ -1
NPIPA3F8WFD2 UBA52-201ENST00000430157 572 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 AC098820.1-202ENST00000438978 750 ntTSL 3 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 AC130689.1-201ENST00000451056 408 ntBASIC8.82□□□□□ -1
NPIPA3F8WFD2 AL360181.1-201ENST00000452591 184 ntTSL 5 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 AL158090.1-201ENST00000453921 602 ntTSL 2 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 CUTA-213ENST00000494751 731 ntTSL 5 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 UQCRBP3-201ENST00000509483 312 ntBASIC8.82□□□□□ -1
NPIPA3F8WFD2 AC006499.7-201ENST00000512421 1117 ntBASIC8.82□□□□□ -1
NPIPA3F8WFD2 TECRP1-201ENST00000513307 445 ntBASIC8.82□□□□□ -1
NPIPA3F8WFD2 SCARNA16-201ENST00000515981 187 ntBASIC8.82□□□□□ -1
NPIPA3F8WFD2 ANKRD46-203ENST00000519316 713 ntTSL 5 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 AC008663.3-201ENST00000520300 457 ntTSL 3 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 HAVCR2-204ENST00000522593 975 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 MTFR1L-215ENST00000524618 1217 ntTSL 2 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 MORN5-205ENST00000536616 596 ntTSL 1 (best) BASIC8.82□□□□□ -1
NPIPA3F8WFD2 LINC02439-201ENST00000538783 450 ntTSL 3 BASIC8.82□□□□□ -1
NPIPA3F8WFD2 NINJ2-205ENST00000542920 670 ntTSL 2 BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms