Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DPF3-215ENST00000610283 4520 ntTSL 2 BASIC10.04□□□□□ -0.8
SLC1A1P43005 ATXN1L-201ENST00000427980 7886 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 RBM17-205ENST00000446108 3751 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 RBM4-206ENST00000483858 1548 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 AC008074.3-201ENST00000561559 1907 ntBASIC10.04□□□□□ -0.8
SLC1A1P43005 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 AC120036.5-201ENST00000528139 2491 ntBASIC10.04□□□□□ -0.8
SLC1A1P43005 AC096720.2-201ENST00000623308 2458 ntBASIC10.04□□□□□ -0.8
SLC1A1P43005 LINC01838-201ENST00000595783 1657 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 AC132008.1-201ENST00000394682 286 ntBASIC10.04□□□□□ -0.8
SLC1A1P43005 LDHAP7-201ENST00000398295 965 ntBASIC10.04□□□□□ -0.8
SLC1A1P43005 TMEM139-203ENST00000409244 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 AL360268.2-201ENST00000414976 380 ntTSL 3 BASIC10.04□□□□□ -0.8
SLC1A1P43005 AP000233.2-202ENST00000418942 684 ntTSL 5 BASIC10.04□□□□□ -0.8
SLC1A1P43005 AL021707.4-201ENST00000423346 410 ntTSL 5 BASIC10.04□□□□□ -0.8
SLC1A1P43005 AC005105.1-201ENST00000454851 792 ntBASIC10.04□□□□□ -0.8
SLC1A1P43005 AC245595.1-202ENST00000457390 425 ntTSL 5 BASIC10.04□□□□□ -0.8
SLC1A1P43005 AL627309.2-201ENST00000493797 323 ntTSL 2 BASIC10.04□□□□□ -0.8
SLC1A1P43005 MBL1P-202ENST00000497731 758 ntBASIC10.04□□□□□ -0.8
SLC1A1P43005 HULC-201ENST00000503668 556 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 SUCLG2P4-201ENST00000514739 1027 ntBASIC10.04□□□□□ -0.8
SLC1A1P43005 KCTD21-AS1-202ENST00000523626 555 ntTSL 4 BASIC10.04□□□□□ -0.8
SLC1A1P43005 CD3E-204ENST00000528600 1289 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SLC1A1P43005 AP000781.2-202ENST00000529411 681 ntAPPRIS P1 TSL 4 BASIC10.04□□□□□ -0.8
SLC1A1P43005 BDNF-AS-209ENST00000532965 572 ntTSL 4 BASIC10.04□□□□□ -0.8
SLC1A1P43005 AC002070.1-201ENST00000537366 693 ntTSL 3 BASIC10.04□□□□□ -0.8
SLC1A1P43005 AL133372.2-202ENST00000549360 768 ntTSL 3 BASIC10.04□□□□□ -0.8
SLC1A1P43005 AC009119.3-201ENST00000562835 388 ntTSL 3 BASIC10.04□□□□□ -0.8
SLC1A1P43005 AC132938.1-201ENST00000566971 360 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 RN7SL122P-201ENST00000579362 301 ntBASIC10.04□□□□□ -0.8
SLC1A1P43005 RPL36-205ENST00000579649 449 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SLC1A1P43005 ZNF793-AS1-204ENST00000588845 545 ntTSL 3 BASIC10.04□□□□□ -0.8
SLC1A1P43005 AC005392.2-201ENST00000595748 301 ntTSL 3 BASIC10.04□□□□□ -0.8
SLC1A1P43005 VDAC3P1-201ENST00000604654 850 ntBASIC10.04□□□□□ -0.8
SLC1A1P43005 SZRD1-210ENST00000492354 3401 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 LINC00265-201ENST00000340510 3049 ntTSL 5 BASIC10.04□□□□□ -0.8
SLC1A1P43005 LINC01641-202ENST00000445817 1971 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SLC1A1P43005 LDB2-201ENST00000304523 2548 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 ZNF280A-201ENST00000302097 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 GPRC5D-AS1-202ENST00000499948 1746 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 RHPN2-201ENST00000254260 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 RPGR-201ENST00000318842 3108 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 CD3EAP-201ENST00000309424 3286 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 PATE3-201ENST00000445202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 AL035696.1-201ENST00000381078 2007 ntTSL 2 BASIC10.04□□□□□ -0.8
SLC1A1P43005 TIMP2-202ENST00000536189 3415 ntTSL 2 BASIC10.04□□□□□ -0.8
SLC1A1P43005 LRRC27-204ENST00000368614 6374 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 AC100827.3-201ENST00000566291 2155 ntBASIC10.04□□□□□ -0.8
SLC1A1P43005 RUFY3-204ENST00000502653 2342 ntTSL 2 BASIC10.04□□□□□ -0.8
SLC1A1P43005 CFAP161-201ENST00000286732 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 AC007424.1-201ENST00000552582 1641 ntTSL 2 BASIC10.04□□□□□ -0.8
SLC1A1P43005 KBTBD4-201ENST00000395288 2460 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SLC1A1P43005 DOCK2-217ENST00000540750 1753 ntTSL 5 BASIC10.03□□□□□ -0.8
SLC1A1P43005 CCDC25-201ENST00000356537 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 SMC1B-202ENST00000404354 3636 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 ATP7B-215ENST00000634844 4398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 ZNF366-201ENST00000318442 3830 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 ZNF185-201ENST00000318504 4148 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
SLC1A1P43005 CALCOCO1-210ENST00000548263 3888 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 AL392183.1-201ENST00000606622 2436 ntTSL 4 BASIC10.03□□□□□ -0.8
SLC1A1P43005 RSPH4A-203ENST00000368581 2704 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC10.03□□□□□ -0.8
SLC1A1P43005 DCTN6-201ENST00000221114 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 RPL38-201ENST00000311111 1170 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 TEX35-201ENST00000319416 1023 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 OR6T1-201ENST00000321252 1089 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
SLC1A1P43005 OR51I2-201ENST00000341449 1070 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
SLC1A1P43005 SLF2-203ENST00000370271 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 U3.16-201ENST00000384391 209 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 NBPF4-201ENST00000415641 2485 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
SLC1A1P43005 AC098828.3-201ENST00000430429 746 ntTSL 3 BASIC10.03□□□□□ -0.8
SLC1A1P43005 FTLP4-201ENST00000430740 493 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 AC079355.2-201ENST00000440057 190 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 SMIM10L2B-AS1-201ENST00000453528 1027 ntTSL 5 BASIC10.03□□□□□ -0.8
SLC1A1P43005 E2F6P4-201ENST00000468625 514 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 AC120036.1-201ENST00000479243 654 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 TRMT112P1-201ENST00000505515 351 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 RNU4ATAC12P-201ENST00000516460 113 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 WBP1LP10-201ENST00000519787 364 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 MTND6P3-201ENST00000520612 542 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 DCTN6-203ENST00000520829 880 ntTSL 2 BASIC10.03□□□□□ -0.8
SLC1A1P43005 AP002957.1-203ENST00000526091 1897 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 RPS3-214ENST00000530164 1878 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SLC1A1P43005 ZFHX2-AS1-203ENST00000556354 931 ntTSL 3 BASIC10.03□□□□□ -0.8
SLC1A1P43005 RNASE12-201ENST00000556526 631 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
SLC1A1P43005 CSHL1-210ENST00000561003 880 ntTSL 2 BASIC10.03□□□□□ -0.8
SLC1A1P43005 AC092115.2-201ENST00000562696 575 ntTSL 3 BASIC10.03□□□□□ -0.8
SLC1A1P43005 AC007610.3-201ENST00000566879 934 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 AC132186.1-201ENST00000566896 354 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 AC126335.1-201ENST00000568414 510 ntTSL 2 BASIC10.03□□□□□ -0.8
SLC1A1P43005 AC103810.2-201ENST00000577938 559 ntTSL 5 BASIC10.03□□□□□ -0.8
SLC1A1P43005 AC098847.2-202ENST00000592549 959 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 LYPLA2P2-201ENST00000600506 676 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 HINT1P2-201ENST00000604731 235 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 MIR1273H-201ENST00000612921 116 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 AC016991.1-201ENST00000621514 385 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 CU633904.2-201ENST00000624595 879 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 SNORA17B-202ENST00000626886 136 ntBASIC10.03□□□□□ -0.8
SLC1A1P43005 LINC00595-209ENST00000634389 549 ntTSL 4 BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms