Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CLCA3PQ9Y6N3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCA3PQ9Y6N3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCA3PQ9Y6N3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCA3PQ9Y6N3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCA3PQ9Y6N3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCA3PQ9Y6N3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CLCA3PQ9Y6N3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCA3PQ9Y6N3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 AC245052.3-201ENST00000450182 901 ntBASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 TERF1P5-201ENST00000477545 1207 ntBASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 RARRES2P11-201ENST00000635158 484 ntBASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 AC073111.5-205ENST00000641717 521 ntBASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCA3PQ9Y6N3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 DUX4L16-201ENST00000555130 1264 ntBASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 AC231657.2-201ENST00000624556 255 ntBASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLCA3PQ9Y6N3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCA3PQ9Y6N3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.48■□□□□ 0.71
CLCA3PQ9Y6N3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.48■□□□□ 0.71
CLCA3PQ9Y6N3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CLCA3PQ9Y6N3 AC013268.1-206ENST00000638368 961 ntBASIC19.48■□□□□ 0.71
CLCA3PQ9Y6N3 AC112229.1-201ENST00000639295 961 ntBASIC19.48■□□□□ 0.71
CLCA3PQ9Y6N3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.48■□□□□ 0.71
CLCA3PQ9Y6N3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCA3PQ9Y6N3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLCA3PQ9Y6N3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 AC007322.1-201ENST00000426983 750 ntBASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 CDCA4P2-201ENST00000441182 718 ntBASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 AC026185.1-201ENST00000445748 174 ntBASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.47■□□□□ 0.71
CLCA3PQ9Y6N3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCA3PQ9Y6N3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCA3PQ9Y6N3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CLCA3PQ9Y6N3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCA3PQ9Y6N3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCA3PQ9Y6N3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCA3PQ9Y6N3 RBM17P2-201ENST00000616397 1405 ntBASIC19.46■□□□□ 0.71
CLCA3PQ9Y6N3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.46■□□□□ 0.71
CLCA3PQ9Y6N3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLCA3PQ9Y6N3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CLCA3PQ9Y6N3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.46■□□□□ 0.71
CLCA3PQ9Y6N3 AC243732.1-201ENST00000612648 864 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms