Protein–RNA interactions for Protein: Q9Y678

COPG1, Coatomer subunit gamma-1, humanhuman

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1Q9Y678 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPG1Q9Y678 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
COPG1Q9Y678 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPG1Q9Y678 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPG1Q9Y678 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPG1Q9Y678 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
COPG1Q9Y678 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPG1Q9Y678 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.31■□□□□ 0.84
COPG1Q9Y678 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.31■□□□□ 0.84
COPG1Q9Y678 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPG1Q9Y678 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPG1Q9Y678 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPG1Q9Y678 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
COPG1Q9Y678 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPG1Q9Y678 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
COPG1Q9Y678 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
COPG1Q9Y678 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.31■□□□□ 0.84
COPG1Q9Y678 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.31■□□□□ 0.84
COPG1Q9Y678 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
COPG1Q9Y678 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPG1Q9Y678 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPG1Q9Y678 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
COPG1Q9Y678 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COPG1Q9Y678 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.3■□□□□ 0.84
COPG1Q9Y678 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
COPG1Q9Y678 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COPG1Q9Y678 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPG1Q9Y678 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.3■□□□□ 0.84
COPG1Q9Y678 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.3■□□□□ 0.84
COPG1Q9Y678 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.3■□□□□ 0.84
COPG1Q9Y678 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPG1Q9Y678 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.3■□□□□ 0.84
COPG1Q9Y678 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPG1Q9Y678 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
COPG1Q9Y678 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
COPG1Q9Y678 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPG1Q9Y678 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COPG1Q9Y678 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.29■□□□□ 0.84
COPG1Q9Y678 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.29■□□□□ 0.84
COPG1Q9Y678 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPG1Q9Y678 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPG1Q9Y678 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COPG1Q9Y678 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPG1Q9Y678 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.29■□□□□ 0.84
COPG1Q9Y678 KRT18P14-201ENST00000534205 1250 ntBASIC20.29■□□□□ 0.84
COPG1Q9Y678 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.29■□□□□ 0.84
COPG1Q9Y678 LINC02228-203ENST00000641970 1355 ntBASIC20.29■□□□□ 0.84
COPG1Q9Y678 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COPG1Q9Y678 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPG1Q9Y678 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPG1Q9Y678 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPG1Q9Y678 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPG1Q9Y678 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPG1Q9Y678 AP006587.3-201ENST00000525742 1516 ntBASIC20.28■□□□□ 0.84
COPG1Q9Y678 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPG1Q9Y678 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPG1Q9Y678 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.28■□□□□ 0.84
COPG1Q9Y678 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
COPG1Q9Y678 ID1-201ENST00000376105 1233 ntBASIC20.28■□□□□ 0.84
COPG1Q9Y678 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.28■□□□□ 0.84
COPG1Q9Y678 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COPG1Q9Y678 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.28■□□□□ 0.84
COPG1Q9Y678 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPG1Q9Y678 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.28■□□□□ 0.84
COPG1Q9Y678 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.28■□□□□ 0.84
COPG1Q9Y678 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
COPG1Q9Y678 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COPG1Q9Y678 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.28■□□□□ 0.84
COPG1Q9Y678 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COPG1Q9Y678 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPG1Q9Y678 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPG1Q9Y678 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COPG1Q9Y678 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
COPG1Q9Y678 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.27■□□□□ 0.84
COPG1Q9Y678 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.27■□□□□ 0.84
COPG1Q9Y678 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.27■□□□□ 0.84
COPG1Q9Y678 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COPG1Q9Y678 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.27■□□□□ 0.84
COPG1Q9Y678 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
COPG1Q9Y678 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPG1Q9Y678 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
COPG1Q9Y678 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPG1Q9Y678 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.27■□□□□ 0.84
COPG1Q9Y678 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.27■□□□□ 0.84
COPG1Q9Y678 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
COPG1Q9Y678 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
COPG1Q9Y678 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPG1Q9Y678 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPG1Q9Y678 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPG1Q9Y678 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.27■□□□□ 0.84
COPG1Q9Y678 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.27■□□□□ 0.83
COPG1Q9Y678 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COPG1Q9Y678 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
COPG1Q9Y678 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COPG1Q9Y678 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COPG1Q9Y678 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COPG1Q9Y678 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
COPG1Q9Y678 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPG1Q9Y678 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.26■□□□□ 0.83
COPG1Q9Y678 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms