Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CDC42BPBQ9Y5S2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
CDC42BPBQ9Y5S2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CDC42BPBQ9Y5S2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC31.61■■■□□ 2.65
CDC42BPBQ9Y5S2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC31.61■■■□□ 2.65
CDC42BPBQ9Y5S2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDC42BPBQ9Y5S2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CDC42BPBQ9Y5S2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CDC42BPBQ9Y5S2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC31.6■■■□□ 2.65
CDC42BPBQ9Y5S2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC31.6■■■□□ 2.65
CDC42BPBQ9Y5S2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDC42BPBQ9Y5S2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC31.6■■■□□ 2.65
CDC42BPBQ9Y5S2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
CDC42BPBQ9Y5S2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDC42BPBQ9Y5S2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC31.6■■■□□ 2.65
CDC42BPBQ9Y5S2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC31.6■■■□□ 2.65
CDC42BPBQ9Y5S2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC31.6■■■□□ 2.65
CDC42BPBQ9Y5S2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC31.59■■■□□ 2.65
CDC42BPBQ9Y5S2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDC42BPBQ9Y5S2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDC42BPBQ9Y5S2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDC42BPBQ9Y5S2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDC42BPBQ9Y5S2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC31.59■■■□□ 2.65
CDC42BPBQ9Y5S2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDC42BPBQ9Y5S2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC31.59■■■□□ 2.65
CDC42BPBQ9Y5S2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC31.59■■■□□ 2.65
CDC42BPBQ9Y5S2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CDC42BPBQ9Y5S2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPBQ9Y5S2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPBQ9Y5S2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
CDC42BPBQ9Y5S2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPBQ9Y5S2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC31.58■■■□□ 2.65
CDC42BPBQ9Y5S2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPBQ9Y5S2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPBQ9Y5S2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPBQ9Y5S2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
CDC42BPBQ9Y5S2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPBQ9Y5S2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
CDC42BPBQ9Y5S2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
CDC42BPBQ9Y5S2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC31.58■■■□□ 2.65
CDC42BPBQ9Y5S2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
CDC42BPBQ9Y5S2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPBQ9Y5S2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
CDC42BPBQ9Y5S2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.65
CDC42BPBQ9Y5S2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC31.57■■■□□ 2.64
CDC42BPBQ9Y5S2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC31.57■■■□□ 2.64
CDC42BPBQ9Y5S2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CDC42BPBQ9Y5S2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
CDC42BPBQ9Y5S2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
CDC42BPBQ9Y5S2 AL049637.2-201ENST00000641778 930 ntBASIC31.57■■■□□ 2.64
CDC42BPBQ9Y5S2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CDC42BPBQ9Y5S2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC31.57■■■□□ 2.64
CDC42BPBQ9Y5S2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CDC42BPBQ9Y5S2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CDC42BPBQ9Y5S2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC31.57■■■□□ 2.64
CDC42BPBQ9Y5S2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CDC42BPBQ9Y5S2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CDC42BPBQ9Y5S2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC31.56■■■□□ 2.64
CDC42BPBQ9Y5S2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CDC42BPBQ9Y5S2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
CDC42BPBQ9Y5S2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
CDC42BPBQ9Y5S2 AC239809.2-201ENST00000415381 517 ntBASIC31.55■■■□□ 2.64
CDC42BPBQ9Y5S2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CDC42BPBQ9Y5S2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CDC42BPBQ9Y5S2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CDC42BPBQ9Y5S2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
CDC42BPBQ9Y5S2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC31.55■■■□□ 2.64
CDC42BPBQ9Y5S2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
CDC42BPBQ9Y5S2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC31.55■■■□□ 2.64
CDC42BPBQ9Y5S2 AC211429.1-201ENST00000415277 523 ntBASIC31.55■■■□□ 2.64
CDC42BPBQ9Y5S2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CDC42BPBQ9Y5S2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
CDC42BPBQ9Y5S2 AL356652.1-201ENST00000615962 565 ntBASIC31.55■■■□□ 2.64
CDC42BPBQ9Y5S2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CDC42BPBQ9Y5S2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CDC42BPBQ9Y5S2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
CDC42BPBQ9Y5S2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC31.54■■■□□ 2.64
CDC42BPBQ9Y5S2 FAM210CP-201ENST00000445714 574 ntBASIC31.54■■■□□ 2.64
CDC42BPBQ9Y5S2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC31.54■■■□□ 2.64
CDC42BPBQ9Y5S2 MAX-217ENST00000557277 728 ntTSL 3 BASIC31.54■■■□□ 2.64
CDC42BPBQ9Y5S2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC31.54■■■□□ 2.64
CDC42BPBQ9Y5S2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
CDC42BPBQ9Y5S2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC31.54■■■□□ 2.64
CDC42BPBQ9Y5S2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CDC42BPBQ9Y5S2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CDC42BPBQ9Y5S2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC31.53■■■□□ 2.64
CDC42BPBQ9Y5S2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC31.53■■■□□ 2.64
CDC42BPBQ9Y5S2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC31.53■■■□□ 2.64
CDC42BPBQ9Y5S2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC31.53■■■□□ 2.64
CDC42BPBQ9Y5S2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC31.53■■■□□ 2.64
CDC42BPBQ9Y5S2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CDC42BPBQ9Y5S2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CDC42BPBQ9Y5S2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC31.52■■■□□ 2.64
CDC42BPBQ9Y5S2 AC010331.1-201ENST00000611423 582 ntBASIC31.52■■■□□ 2.64
CDC42BPBQ9Y5S2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CDC42BPBQ9Y5S2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CDC42BPBQ9Y5S2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC31.52■■■□□ 2.64
CDC42BPBQ9Y5S2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
CDC42BPBQ9Y5S2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CDC42BPBQ9Y5S2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms