Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSM5Q9Y4Y9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.03■□□□□ 0.32
LSM5Q9Y4Y9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.03■□□□□ 0.32
LSM5Q9Y4Y9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LSM5Q9Y4Y9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSM5Q9Y4Y9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LSM5Q9Y4Y9 AC021242.3-201ENST00000607598 1377 ntBASIC17.02■□□□□ 0.32
LSM5Q9Y4Y9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSM5Q9Y4Y9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.02■□□□□ 0.32
LSM5Q9Y4Y9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSM5Q9Y4Y9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.02■□□□□ 0.32
LSM5Q9Y4Y9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.02■□□□□ 0.32
LSM5Q9Y4Y9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LSM5Q9Y4Y9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSM5Q9Y4Y9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSM5Q9Y4Y9 YBX1P4-201ENST00000392794 808 ntBASIC17.02■□□□□ 0.32
LSM5Q9Y4Y9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.02■□□□□ 0.32
LSM5Q9Y4Y9 AC068587.7-201ENST00000641602 218 ntBASIC17.02■□□□□ 0.32
LSM5Q9Y4Y9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSM5Q9Y4Y9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LSM5Q9Y4Y9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
LSM5Q9Y4Y9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
LSM5Q9Y4Y9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LSM5Q9Y4Y9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.02■□□□□ 0.31
LSM5Q9Y4Y9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 AC103834.1-201ENST00000520383 144 ntBASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 AL512408.1-201ENST00000569378 2000 ntBASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
LSM5Q9Y4Y9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 Z92544.1-202ENST00000571933 1220 ntBASIC17■□□□□ 0.31
LSM5Q9Y4Y9 SMG8-203ENST00000578922 2178 ntBASIC17■□□□□ 0.31
LSM5Q9Y4Y9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 AP004607.7-201ENST00000527152 1677 ntBASIC17■□□□□ 0.31
LSM5Q9Y4Y9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM5Q9Y4Y9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 AC020763.4-201ENST00000623414 4170 ntBASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 TSPY13P-201ENST00000338964 914 ntBASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 BX664725.1-201ENST00000438252 379 ntBASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 ABHD17AP5-201ENST00000580133 923 ntBASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 HSD17B1P1-201ENST00000590052 955 ntBASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM5Q9Y4Y9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM5Q9Y4Y9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.98■□□□□ 0.31
LSM5Q9Y4Y9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
LSM5Q9Y4Y9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms