Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP3Q9Y446 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PKP3Q9Y446 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PKP3Q9Y446 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.74■□□□□ 0.91
PKP3Q9Y446 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.74■□□□□ 0.91
PKP3Q9Y446 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.74■□□□□ 0.91
PKP3Q9Y446 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP3Q9Y446 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.74■□□□□ 0.91
PKP3Q9Y446 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP3Q9Y446 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PKP3Q9Y446 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PKP3Q9Y446 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PKP3Q9Y446 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PKP3Q9Y446 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PKP3Q9Y446 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.73■□□□□ 0.91
PKP3Q9Y446 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PKP3Q9Y446 MFSD11-216ENST00000590393 1141 ntBASIC20.73■□□□□ 0.91
PKP3Q9Y446 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.73■□□□□ 0.91
PKP3Q9Y446 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PKP3Q9Y446 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PKP3Q9Y446 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PKP3Q9Y446 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PKP3Q9Y446 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
PKP3Q9Y446 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.73■□□□□ 0.91
PKP3Q9Y446 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PKP3Q9Y446 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.73■□□□□ 0.91
PKP3Q9Y446 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PKP3Q9Y446 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PKP3Q9Y446 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PKP3Q9Y446 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP3Q9Y446 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PKP3Q9Y446 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PKP3Q9Y446 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PKP3Q9Y446 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PKP3Q9Y446 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP3Q9Y446 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PKP3Q9Y446 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP3Q9Y446 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.72■□□□□ 0.91
PKP3Q9Y446 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PKP3Q9Y446 TERF1P5-201ENST00000477545 1207 ntBASIC20.72■□□□□ 0.91
PKP3Q9Y446 AL137784.2-201ENST00000607332 1000 ntBASIC20.72■□□□□ 0.91
PKP3Q9Y446 AC011767.1-201ENST00000617410 1153 ntBASIC20.72■□□□□ 0.91
PKP3Q9Y446 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PKP3Q9Y446 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP3Q9Y446 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP3Q9Y446 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PKP3Q9Y446 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PKP3Q9Y446 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.71■□□□□ 0.91
PKP3Q9Y446 AC121338.2-201ENST00000622535 1744 ntBASIC20.71■□□□□ 0.91
PKP3Q9Y446 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PKP3Q9Y446 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
PKP3Q9Y446 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.71■□□□□ 0.91
PKP3Q9Y446 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.71■□□□□ 0.91
PKP3Q9Y446 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
PKP3Q9Y446 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.71■□□□□ 0.91
PKP3Q9Y446 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PKP3Q9Y446 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PKP3Q9Y446 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PKP3Q9Y446 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.7■□□□□ 0.9
PKP3Q9Y446 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP3Q9Y446 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.7■□□□□ 0.9
PKP3Q9Y446 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
PKP3Q9Y446 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PKP3Q9Y446 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP3Q9Y446 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.7■□□□□ 0.9
PKP3Q9Y446 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PKP3Q9Y446 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PKP3Q9Y446 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.7■□□□□ 0.9
PKP3Q9Y446 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PKP3Q9Y446 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PKP3Q9Y446 IKBKGP1-201ENST00000612193 1073 ntBASIC20.7■□□□□ 0.9
PKP3Q9Y446 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.7■□□□□ 0.9
PKP3Q9Y446 AC013268.1-206ENST00000638368 961 ntBASIC20.7■□□□□ 0.9
PKP3Q9Y446 AC112229.1-201ENST00000639295 961 ntBASIC20.7■□□□□ 0.9
PKP3Q9Y446 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PKP3Q9Y446 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PKP3Q9Y446 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP3Q9Y446 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PKP3Q9Y446 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP3Q9Y446 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PKP3Q9Y446 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PKP3Q9Y446 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PKP3Q9Y446 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PKP3Q9Y446 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP3Q9Y446 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP3Q9Y446 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP3Q9Y446 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP3Q9Y446 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.69■□□□□ 0.9
PKP3Q9Y446 AC091799.1-201ENST00000422823 811 ntBASIC20.69■□□□□ 0.9
PKP3Q9Y446 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PKP3Q9Y446 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.69■□□□□ 0.9
PKP3Q9Y446 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.69■□□□□ 0.9
PKP3Q9Y446 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP3Q9Y446 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP3Q9Y446 AC116050.2-201ENST00000612102 1779 ntBASIC20.69■□□□□ 0.9
PKP3Q9Y446 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP3Q9Y446 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PKP3Q9Y446 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.68■□□□□ 0.9
PKP3Q9Y446 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.68■□□□□ 0.9
PKP3Q9Y446 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms